Os04g0204100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.
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Os04g0204100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 382.37 | 0.919 | 3.73 | 1.61 | 1.61 | -1.89 | 0.361 | 5.64 | -0.137 | 21.8 | 26 | 910 | -- | -- |
| 391.7 | 0.922 | 3.8 | 0.825 | 1.56 | -1.44 | 0.127 | -- | -0.167 | 22.1 | 24.16 | 949 | -- | -- |
| 382.82 | 0.911 | 3.73 | 1.65 | 1.6 | -1.92 | -- | 6.02 | -0.128 | 21.8 | 26.03 | 909 | -- | -- |
| 390.91 | 0.921 | 3.83 | 0.659 | 1.58 | -1.37 | -- | -- | -0.229 | 21.9 | 24.43 | 900 | -- | -- |
| 485.66 | 1.03 | 3.7 | 1.76 | -- | -1.53 | -- | 6.26 | -0.353 | -- | 28.56 | 1512 | -- | -- |
| 433.35 | 0.976 | 3.86 | 0.291 | 1.18 | -- | 0.416 | -- | -0.406 | 22 | -- | -- | -- | -- |
| 434.03 | 0.976 | 3.86 | 0.275 | 1.17 | -- | -- | -- | -0.407 | 22.1 | -- | -- | -- | -- |
| 461.88 | 1.01 | 3.77 | 0.646 | -- | -1.96 | -- | -- | -0.145 | -- | 14.4 | 1540 | -- | -- |
| 399.85 | 0.931 | 3.86 | -- | 1.5 | -1.16 | -- | -- | -0.385 | 22.1 | 25.42 | 909 | -- | -- |
| 517.25 | 1.06 | 3.83 | 0.29 | -- | -- | -- | -- | -0.406 | -- | -- | -- | -- | -- |
| 436.02 | 0.977 | 3.86 | -- | 1.18 | -- | -- | -- | -0.438 | 22.1 | -- | -- | -- | -- |
| 472.26 | 1.02 | 3.79 | -- | -- | -1.76 | -- | -- | -0.239 | -- | 13.8 | 1536 | -- | -- |
| 519.47 | 1.06 | 3.83 | -- | -- | -- | -- | -- | -0.438 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 374.49 | temperature | 20 | 30 | > th | dose dependent | rect. | 11 | 19 |
| 6 | 375.69 | temperature | 10 | 270 | > th | dose dependent | rect. | 8 | 20 |
| 22 | 378.66 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 6 |
| 24 | 378.77 | temperature | 10 | 720 | > th | dose dependent | rect. | 9 | 12 |
| 25 | 378.86 | temperature | 10 | 10 | > th | dose dependent | sin | 15 | NA |
| 35 | 379.32 | temperature | 10 | 720 | > th | dose dependent | rect. | 11 | 9 |
| 61 | 380.11 | temperature | 30 | 10 | < th | dose dependent | sin | 16 | NA |
| 78 | 381.14 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 22 |
| 85 | 381.34 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 18 |
| 95 | 381.69 | temperature | 10 | 720 | > th | dose dependent | sin | 19 | NA |
| 99 | 381.72 | temperature | 30 | 90 | < th | dose dependent | rect. | 16 | 9 |
| 127 | 382.45 | temperature | 30 | 720 | < th | dose dependent | rect. | 10 | 14 |
| 137 | 382.63 | temperature | 25 | 10 | < th | dose dependent | sin | 19 | NA |
| 139 | 382.64 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 16 |
| 140 | 382.65 | temperature | 30 | 10 | < th | dose dependent | rect. | 16 | 10 |
| 145 | 382.73 | temperature | 25 | 720 | > th | dose dependent | sin | 15 | NA |
| 180 | 383.09 | temperature | 25 | 720 | > th | dose dependent | rect. | 15 | 8 |
| 224 | 383.57 | temperature | 30 | 720 | < th | dose dependent | sin | 20 | NA |
| 266 | 383.88 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 1 |
| 365 | 385.18 | temperature | 25 | 720 | > th | dose dependent | rect. | 11 | 19 |
| 372 | 385.23 | temperature | 20 | 30 | > th | dose dependent | rect. | 11 | 15 |
| 512 | 386.65 | temperature | 30 | 720 | < th | dose dependent | rect. | 13 | 6 |
| 518 | 386.68 | temperature | 20 | 30 | > th | dose dependent | rect. | 11 | 12 |
| 579 | 387.14 | temperature | 30 | 10 | < th | dose dependent | rect. | 14 | 12 |
| 731 | 388.43 | temperature | 10 | 720 | > th | dose dependent | rect. | 14 | 14 |
| 755 | 388.64 | temperature | 25 | 90 | > th | dose independent | rect. | 11 | 19 |
| 794 | 388.90 | temperature | 15 | 720 | > th | dose dependent | rect. | 14 | 12 |
| 817 | 389.07 | temperature | 25 | 90 | > th | dose independent | rect. | 11 | 16 |
| 863 | 389.37 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 23 |
| 899 | 389.59 | radiation | 1 | 720 | > th | dose dependent | rect. | 16 | 14 |
| 919 | 389.70 | temperature | 25 | 720 | > th | dose dependent | no | NA | NA |
| 933 | 389.77 | temperature | 25 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 934 | 389.78 | temperature | 25 | 90 | < th | dose independent | rect. | 16 | 9 |