Os04g0204000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.
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Os04g0204000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 192.59 | 0.652 | 4.12 | 0.57 | 0.469 | 1.79 | 0.0239 | 0.555 | 0.229 | 16.7 | 24.1 | 834 | -- | -- |
| 192.97 | 0.647 | 4.11 | 0.656 | 0.464 | 1.7 | 0.035 | -- | 0.249 | 16.6 | 24.3 | 833 | -- | -- |
| 192.6 | 0.646 | 4.12 | 0.57 | 0.469 | 1.79 | -- | 0.556 | 0.229 | 16.7 | 24.1 | 833 | -- | -- |
| 192.97 | 0.647 | 4.11 | 0.657 | 0.469 | 1.7 | -- | -- | 0.25 | 16.7 | 24.31 | 833 | -- | -- |
| 203.01 | 0.664 | 4.11 | 0.589 | -- | 1.82 | -- | 0.509 | 0.246 | -- | 24.49 | 978 | -- | -- |
| 234.47 | 0.718 | 4.18 | 0.173 | 0.527 | -- | 0.168 | -- | -0.0849 | 15.1 | -- | -- | -- | -- |
| 234.56 | 0.717 | 4.18 | 0.176 | 0.529 | -- | -- | -- | -0.0839 | 15.1 | -- | -- | -- | -- |
| 203.27 | 0.664 | 4.1 | 0.673 | -- | 1.76 | -- | -- | 0.268 | -- | 24.8 | 994 | -- | -- |
| 202.93 | 0.663 | 4.14 | -- | 0.452 | 1.41 | -- | -- | 0.128 | 16.4 | 24.4 | 824 | -- | -- |
| 250.5 | 0.74 | 4.18 | 0.154 | -- | -- | -- | -- | -0.0977 | -- | -- | -- | -- | -- |
| 235.38 | 0.718 | 4.18 | -- | 0.525 | -- | -- | -- | -0.104 | 15.1 | -- | -- | -- | -- |
| 213.6 | 0.681 | 4.13 | -- | -- | 1.45 | -- | -- | 0.141 | -- | 24.8 | 964 | -- | -- |
| 251.13 | 0.74 | 4.18 | -- | -- | -- | -- | -- | -0.115 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 184.66 | temperature | 15 | 720 | > th | dose dependent | sin | 8 | NA |
| 3 | 184.91 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 17 |
| 7 | 185.59 | temperature | 10 | 720 | > th | dose dependent | rect. | 2 | 7 |
| 13 | 186.04 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 13 |
| 15 | 186.10 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 15 |
| 18 | 186.17 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 9 |
| 48 | 187.27 | temperature | 30 | 720 | < th | dose dependent | sin | 8 | NA |
| 63 | 187.63 | temperature | 30 | 720 | < th | dose dependent | rect. | 21 | 15 |
| 154 | 189.70 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 19 |
| 202 | 190.30 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 13 |
| 447 | 192.90 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 455 | 192.99 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 483 | 193.30 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 491 | 193.39 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 5 |
| 534 | 193.87 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 5 |
| 537 | 193.88 | temperature | 10 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 546 | 194.03 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 2 |
| 550 | 194.09 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 563 | 194.29 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 583 | 194.52 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 601 | 194.70 | wind | 7 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 610 | 194.77 | wind | 7 | 43200 | > th | dose dependent | rect. | 18 | 5 |
| 672 | 195.30 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 733 | 195.72 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 2 |
| 900 | 196.29 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 1 |