Os04g0203100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF239, plant domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0203100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF239, plant domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 60.2 | 0.365 | 2.95 | 0.421 | 0.126 | -63.8 | -0.0987 | 227 | 0.0538 | 8.94 | 0.4986 | 10 | -- | -- |
| 60.23 | 0.364 | 3.09 | -0.0704 | 0.124 | 1.45 | -0.108 | -- | 0.0549 | 9.04 | 0.4986 | 10 | -- | -- |
| 60.23 | 0.361 | 2.95 | 0.418 | 0.127 | -63.9 | -- | 227 | 0.0536 | 8.86 | 0.4985 | 9 | -- | -- |
| 60.27 | 0.364 | 3.09 | -0.0742 | 0.125 | 1.45 | -- | -- | 0.0548 | 8.94 | 0.4985 | 9 | -- | -- |
| 61.14 | 0.364 | 2.95 | 0.419 | -- | -63.9 | -- | 228 | 0.0556 | -- | 0.499 | 9 | -- | -- |
| 62.32 | 0.37 | 3.09 | -0.0571 | 0.129 | -- | -0.0881 | -- | 0.0521 | 8.74 | -- | -- | -- | -- |
| 62.35 | 0.37 | 3.09 | -0.0603 | 0.129 | -- | -- | -- | 0.052 | 8.58 | -- | -- | -- | -- |
| 61.16 | 0.366 | 3.09 | -0.0744 | -- | 1.46 | -- | -- | 0.0556 | -- | 0.6785 | 9 | -- | -- |
| 60.41 | 0.364 | 3.09 | -- | 0.125 | 1.43 | -- | -- | 0.063 | 8.98 | 0.4985 | 9 | -- | -- |
| 63.29 | 0.372 | 3.09 | -0.0598 | -- | -- | -- | -- | 0.0531 | -- | -- | -- | -- | -- |
| 62.44 | 0.37 | 3.09 | -- | 0.129 | -- | -- | -- | 0.0587 | 8.61 | -- | -- | -- | -- |
| 61.3 | 0.366 | 3.09 | -- | -- | 1.44 | -- | -- | 0.0638 | -- | 0.8531 | 9 | -- | -- |
| 63.38 | 0.372 | 3.09 | -- | -- | -- | -- | -- | 0.0598 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 57.66 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 2 | 57.69 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 3 | 57.82 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 21 | 3 |
| 6 | 57.88 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 21 | 6 |
| 21 | 58.05 | atmosphere | 1010.0 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 129 | 58.26 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 139 | 58.26 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 161 | 58.42 | atmosphere | 1010.0 | 30 | > th | dose dependent | sin | 23 | NA |
| 431 | 58.57 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 552 | 58.73 | radiation | 1.0 | 270 | < th | dose independent | rect. | 8 | 1 |
| 553 | 58.73 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 560 | 58.84 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 577 | 58.93 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 699 | 59.28 | wind | 1.0 | 30 | < th | dose independent | rect. | 10 | 1 |
| 700 | 59.28 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 704 | 59.28 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 707 | 59.28 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 708 | 59.28 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 12 | 23 |
| 712 | 59.28 | wind | 1.0 | 30 | < th | dose dependent | rect. | 10 | 1 |
| 713 | 59.28 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 727 | 59.34 | wind | 9.0 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 736 | 59.40 | humidity | 50.0 | 10 | > th | dose independent | sin | 6 | NA |
| 740 | 59.44 | atmosphere | 1010.0 | 10 | > th | dose independent | rect. | 11 | 1 |
| 800 | 59.47 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 802 | 59.47 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 10 | 1 |
| 804 | 59.48 | humidity | 70.0 | 30 | < th | dose independent | rect. | 10 | 1 |
| 826 | 59.54 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 10 | 1 |
| 844 | 59.59 | radiation | 40.0 | 30 | < th | dose independent | rect. | 10 | 1 |
| 860 | 59.61 | temperature | 25.0 | 30 | > th | dose independent | rect. | 10 | 1 |
| 867 | 59.65 | radiation | 20.0 | 30 | > th | dose independent | rect. | 10 | 1 |
| 875 | 59.67 | humidity | 80.0 | 30 | < th | dose dependent | rect. | 10 | 1 |
| 916 | 59.74 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 18 | 14 |
| 919 | 59.75 | wind | 5.0 | 30 | < th | dose dependent | rect. | 10 | 1 |
| 921 | 59.76 | temperature | 30.0 | 30 | < th | dose independent | rect. | 10 | 1 |
| 925 | 59.77 | humidity | 60.0 | 30 | > th | dose independent | rect. | 10 | 1 |
| 928 | 59.78 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 18 | 3 |
| 942 | 59.80 | temperature | 10.0 | 30 | > th | dose independent | rect. | 10 | 1 |
| 945 | 59.80 | humidity | 90.0 | 30 | < th | dose independent | rect. | 10 | 1 |
| 949 | 59.80 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 10 | 1 |
| 950 | 59.80 | wind | 5.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 951 | 59.80 | temperature | 10.0 | 30 | > th | dose independent | rect. | 11 | 23 |
| 952 | 59.80 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 10 | 1 |
| 960 | 59.82 | wind | 5.0 | 90 | > th | dose dependent | rect. | 3 | 4 |
| 961 | 59.83 | wind | 1.0 | 30 | > th | dose independent | rect. | 10 | 1 |
| 962 | 59.83 | wind | 5.0 | 90 | > th | dose independent | rect. | 3 | 2 |
| 980 | 59.84 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 10 | 1 |
| 981 | 59.84 | wind | 5.0 | 90 | > th | dose dependent | rect. | 3 | 2 |
| 991 | 59.85 | wind | 9.0 | 4320 | < th | dose independent | rect. | 14 | 1 |