Os04g0201600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os04g0201600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 67.37 | 0.386 | 3.16 | -0.114 | 0.215 | 14.3 | -0.0182 | -51.8 | 0.129 | 6.01 | 0.8 | 60 | -- | -- |
| 77.16 | 0.412 | 3.08 | 0.189 | 0.189 | -0.243 | -0.13 | -- | 0.124 | 5.9 | 0.8 | 60 | -- | -- |
| 67.25 | 0.382 | 3.14 | -0.0696 | 0.22 | 13.8 | -- | -49.8 | 0.129 | 5.96 | 1.001 | 79 | -- | -- |
| 69.23 | 0.388 | 3.09 | 0.151 | 0.2 | 2.58 | -- | -- | 0.118 | 6.76 | 1.5 | 131 | -- | -- |
| 69.59 | 0.389 | 3.15 | -0.0772 | -- | 14.6 | -- | -53.3 | 0.131 | -- | 1 | 79 | -- | -- |
| 77.21 | 0.412 | 3.08 | 0.187 | 0.187 | -- | -0.141 | -- | 0.124 | 5.91 | -- | -- | -- | -- |
| 77.26 | 0.412 | 3.08 | 0.186 | 0.186 | -- | -- | -- | 0.125 | 5.96 | -- | -- | -- | -- |
| 71.64 | 0.394 | 3.08 | 0.163 | -- | 2.5 | -- | -- | 0.137 | -- | 1.5 | 119 | -- | -- |
| 69.76 | 0.389 | 3.08 | -- | 0.22 | 2.63 | -- | -- | 0.119 | 6.42 | 1.5 | 133 | -- | -- |
| 79.06 | 0.415 | 3.09 | 0.192 | -- | -- | -- | -- | 0.129 | -- | -- | -- | -- | -- |
| 78.18 | 0.414 | 3.09 | -- | 0.189 | -- | -- | -- | 0.104 | 5.91 | -- | -- | -- | -- |
| 72.34 | 0.396 | 3.09 | -- | -- | 2.54 | -- | -- | 0.118 | -- | 1.5 | 142 | -- | -- |
| 80.03 | 0.418 | 3.09 | -- | -- | -- | -- | -- | 0.108 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.44 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 2 | 64.45 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 3 | 64.45 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 7 | 64.51 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 11 | 64.53 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 14 | 64.53 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 17 | 64.53 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 18 | 64.53 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 20 | 64.53 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 25 | 64.53 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 26 | 64.53 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 27 | 64.53 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 32 | 64.53 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 34 | 64.54 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 35 | 64.56 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 36 | 64.57 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 37 | 64.57 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 39 | 64.58 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 41 | 64.59 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 44 | 64.60 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 52 | 64.99 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 60 | 65.24 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 107 | 66.90 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 16 | 1 |
| 108 | 67.06 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 16 | 1 |
| 109 | 67.06 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 16 | 1 |
| 110 | 67.08 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 16 | 3 |
| 112 | 67.12 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 17 | 1 |
| 140 | 67.12 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 176 | 67.27 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 16 | 1 |
| 222 | 67.77 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 223 | 67.77 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 388 | 68.62 | precipitation | 0.1 | 10 | > th | dose independent | sin | 20 | NA |
| 389 | 68.62 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 20 | NA |
| 398 | 68.89 | precipitation | 0.1 | 10 | < th | dose independent | sin | 20 | NA |
| 399 | 68.89 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 20 | NA |
| 408 | 69.02 | precipitation | 0.1 | 90 | > th | dose dependent | sin | 20 | NA |
| 411 | 69.06 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 571 | 70.38 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 14 | 3 |
| 591 | 70.58 | atmosphere | 1000.0 | 270 | < th | dose dependent | rect. | 14 | 3 |
| 656 | 71.18 | wind | 9.0 | 4320 | < th | dose independent | rect. | 3 | 1 |
| 697 | 71.38 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 700 | 71.38 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 704 | 71.38 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 713 | 71.38 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 714 | 71.38 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 734 | 71.38 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 737 | 71.38 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 775 | 71.50 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 781 | 71.53 | wind | 1.0 | 10 | > th | dose independent | rect. | 21 | 23 |
| 799 | 71.58 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 817 | 71.63 | precipitation | 0.1 | 90 | > th | dose independent | sin | 20 | NA |
| 844 | 71.71 | precipitation | 0.1 | 90 | < th | dose independent | sin | 20 | NA |
| 845 | 71.71 | precipitation | 0.1 | 90 | > th | dose dependent | no | NA | NA |
| 846 | 71.71 | precipitation | 0.1 | 90 | < th | dose dependent | sin | 20 | NA |
| 928 | 72.33 | wind | 1.0 | 10 | > th | dose independent | rect. | 21 | 9 |
| 946 | 72.41 | humidity | 90.0 | 90 | < th | dose independent | rect. | 1 | 2 |
| 970 | 72.55 | wind | 1.0 | 30 | > th | dose dependent | rect. | 2 | 1 |