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Os04g0198300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.87 (0.0306) R2 : 0.464
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.777 (0.0801) R2dC : 0.115 R2C : 0.186
β3 : -1.53 (0.103) R2dE : 0.279 R2E : 0.35
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.00966 (0.0649) R2dN8 : -6.02e-05 R2N8 : -0.00118
σ : 0.574
deviance : 151.86
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_____
C
peak time of C : 16.2
E
wheather : radiation
threshold : 0.3651
memory length : 98
response mode : > th
dose dependency : dose independent
G
type of G : sin
peak or start time of G : 3.8
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
147.17 0.57 6.86 0.404 0.79 -1.51 0.386 -0.0088 0.0439 16.5 0.37 97 3.97 --
147.17 0.565 6.86 0.405 0.792 -1.52 0.394 -- 0.0448 16.5 0.37 98 3.99 --
147.48 0.566 6.87 0.396 0.776 -1.54 -- -0.147 0.0271 16.2 0.3798 97 3.84 --
147.43 0.566 6.86 0.408 0.773 -1.56 -- -- 0.0461 16.2 0.31 99 3.82 --
178.28 0.622 6.87 0.416 -- -1.68 -- 0.403 0.00698 -- 0.1 98 3.77 --
191.42 0.649 6.91 0.389 1.28 -- 0.638 -- -0.0845 18.5 -- -- -- --
192.42 0.65 6.91 0.381 1.29 -- -- -- -0.0822 18.4 -- -- -- --
177.24 0.62 6.85 0.397 -- -1.74 -- -- 0.0288 -- 0.01124 97 3.57 --
151.86 0.574 6.87 -- 0.777 -1.53 -- -- 0.00966 16.2 0.3651 98 3.8 --
278.5 0.78 6.88 0.348 -- -- -- -- -0.109 -- -- -- -- --
196.24 0.655 6.92 -- 1.28 -- -- -- -0.125 18.4 -- -- -- --
180.44 0.626 6.86 -- -- -1.89 -- -- -0.0135 -- 0.04404 86 3.32 --
281.69 0.783 6.89 -- -- -- -- -- -0.148 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 143.49 radiation 1.0 90 > th dose independent rect. 4 3
13 144.08 radiation 10.0 90 < th dose independent rect. 5 18
14 144.35 temperature 15.0 90 > th dose dependent rect. 5 2
16 145.44 temperature 20.0 90 > th dose independent rect. 5 2
17 145.62 radiation 20.0 90 < th dose independent rect. 5 4
19 145.96 wind 9.0 90 < th dose independent rect. 7 22
20 146.06 radiation 10.0 10 < th dose independent rect. 6 17
24 146.54 atmosphere 1005.0 90 > th dose independent rect. 5 2
26 146.67 temperature 15.0 270 > th dose dependent rect. 3 4
27 146.74 atmosphere 995.0 90 > th dose dependent rect. 5 2
30 146.97 atmosphere 1000.0 10 > th dose independent rect. 7 23
33 147.27 humidity 80.0 90 > th dose independent rect. 5 4
35 147.47 radiation 40.0 90 < th dose dependent rect. 5 4
37 147.60 radiation 1.0 90 < th dose dependent sin 10 NA
61 148.19 humidity 70.0 90 > th dose independent rect. 5 2
64 148.38 radiation 10.0 10 < th dose independent rect. 6 4
65 148.40 radiation 10.0 270 < th dose independent rect. 3 17
68 148.57 radiation 10.0 270 < th dose independent rect. 3 5
69 148.58 precipitation 0.1 90 < th dose independent rect. 5 2
71 148.58 precipitation 0.1 90 < th dose dependent rect. 5 2
74 148.68 wind 7.0 90 < th dose independent rect. 5 2
76 148.68 temperature 10.0 90 > th dose independent rect. 5 2
78 148.68 temperature 30.0 90 < th dose independent rect. 5 2
79 148.68 humidity 50.0 90 > th dose independent rect. 5 2
81 148.68 atmosphere 995.0 90 > th dose independent rect. 5 2
82 148.68 atmosphere 1015.0 90 < th dose independent rect. 5 2
84 148.68 temperature 10.0 90 > th dose independent rect. 7 22
85 148.80 temperature 20.0 270 > th dose independent rect. 3 4
93 149.12 wind 1.0 90 > th dose independent rect. 5 2
98 149.27 radiation 1.0 90 > th dose independent sin 10 NA
102 149.39 radiation 1.0 90 < th dose independent sin 10 NA
105 149.52 wind 9.0 90 < th dose dependent rect. 5 2
108 149.72 radiation 30.0 90 < th dose dependent rect. 5 18
109 149.83 precipitation 0.1 90 < th dose independent rect. 7 22
110 149.83 precipitation 0.1 90 < th dose dependent rect. 7 22
117 150.00 humidity 50.0 90 > th dose dependent rect. 5 4
123 150.16 radiation 1.0 90 > th dose dependent rect. 18 13
126 150.20 radiation 1.0 30 > th dose dependent rect. 5 2
148 150.23 radiation 10.0 10 < th dose independent rect. 6 2
155 150.34 wind 7.0 270 < th dose independent rect. 7 10
176 150.93 humidity 50.0 90 > th dose dependent rect. 5 2
177 150.97 wind 1.0 90 > th dose independent rect. 7 22
179 151.04 radiation 20.0 10 < th dose dependent rect. 6 1
181 151.09 radiation 40.0 90 < th dose dependent rect. 5 2
184 151.17 atmosphere 1005.0 10 > th dose independent rect. 6 1
205 151.47 atmosphere 995.0 10 > th dose dependent rect. 6 1
208 151.51 humidity 90.0 10 < th dose independent rect. 6 1
209 151.51 wind 7.0 10 < th dose dependent rect. 6 1
225 151.57 temperature 20.0 10 > th dose independent rect. 6 1
245 151.74 radiation 10.0 270 < th dose independent rect. 16 15
250 151.85 wind 5.0 10 < th dose independent rect. 6 1
253 151.85 temperature 10.0 10 > th dose independent rect. 6 1
255 151.85 temperature 30.0 10 < th dose independent rect. 6 1
256 151.85 humidity 50.0 10 > th dose independent rect. 6 1
260 151.85 atmosphere 1015.0 10 < th dose independent rect. 6 1
264 151.85 precipitation 0.1 10 < th dose independent rect. 6 1
265 151.85 temperature 10.0 10 > th dose independent rect. 7 23
267 151.85 precipitation 0.1 10 < th dose dependent rect. 6 1
269 151.87 humidity 50.0 10 > th dose dependent rect. 6 1
280 152.07 precipitation 0.1 270 < th dose independent rect. 17 14
281 152.07 precipitation 0.1 270 < th dose dependent rect. 17 14
282 152.09 humidity 90.0 90 < th dose independent rect. 5 2
287 152.17 wind 1.0 270 > th dose independent rect. 3 4
307 152.29 temperature 30.0 30 < th dose dependent rect. 6 1
324 152.36 precipitation 0.1 10 < th dose independent rect. 7 23
325 152.36 precipitation 0.1 10 < th dose dependent rect. 7 23
326 152.41 wind 9.0 10 < th dose independent rect. 7 23
329 152.43 radiation 20.0 270 < th dose dependent rect. 3 6
412 153.06 radiation 10.0 270 < th dose dependent rect. 3 17
426 153.09 radiation 1.0 10 > th dose independent rect. 6 1
458 153.27 humidity 70.0 270 > th dose independent rect. 3 4
459 153.27 precipitation 0.1 270 < th dose independent rect. 3 4
460 153.27 precipitation 0.1 270 < th dose dependent rect. 3 4
461 153.28 radiation 1.0 90 < th dose dependent rect. 23 13
476 153.38 humidity 50.0 90 > th dose independent rect. 7 22
482 153.44 radiation 10.0 10 < th dose dependent rect. 23 7
485 153.45 radiation 1.0 90 < th dose dependent rect. 23 9
489 153.47 atmosphere 995.0 270 > th dose dependent rect. 3 4
494 153.52 wind 1.0 90 > th dose dependent rect. 6 1
496 153.59 wind 9.0 1440 < th dose independent rect. 7 1
497 153.59 temperature 10.0 1440 > th dose independent rect. 7 1
501 153.59 temperature 30.0 1440 < th dose independent rect. 7 1
505 153.59 humidity 50.0 1440 > th dose independent rect. 7 1
510 153.59 atmosphere 995.0 1440 > th dose independent rect. 7 1
511 153.59 atmosphere 1015.0 1440 < th dose independent rect. 7 1
512 153.59 temperature 10.0 1440 > th dose independent rect. 8 23
538 153.72 radiation 40.0 270 < th dose dependent rect. 15 16
542 153.74 temperature 10.0 270 > th dose independent rect. 7 10
543 153.74 atmosphere 1015.0 270 < th dose independent rect. 7 10
544 153.74 temperature 10.0 270 > th dose independent rect. 17 14
566 153.85 atmosphere 1010.0 270 < th dose independent rect. 3 4
570 153.89 wind 9.0 270 < th dose independent rect. 3 4
571 153.89 temperature 10.0 270 > th dose independent rect. 3 4
573 153.89 temperature 30.0 270 < th dose independent rect. 3 4
574 153.89 humidity 50.0 270 > th dose independent rect. 3 4
576 153.89 atmosphere 995.0 270 > th dose independent rect. 3 4
581 153.92 radiation 20.0 10 < th dose dependent rect. 6 3
609 154.18 humidity 90.0 10 < th dose dependent rect. 6 1
622 154.23 temperature 20.0 10 > th dose dependent rect. 17 16
643 154.42 atmosphere 995.0 270 > th dose independent rect. 17 14
647 154.47 radiation 1.0 30 < th dose independent rect. 23 7
678 154.64 radiation 1.0 30 < th dose independent rect. 23 13
682 154.66 precipitation 0.1 270 < th dose independent rect. 7 10
684 154.66 precipitation 0.1 270 < th dose dependent rect. 7 10
694 154.71 wind 9.0 10 < th dose independent rect. 9 20
701 154.76 atmosphere 1015.0 90 < th dose independent rect. 5 18
717 154.90 wind 9.0 270 < th dose independent rect. 17 14
720 154.91 temperature 15.0 90 > th dose independent rect. 5 18
727 154.93 atmosphere 1015.0 10 < th dose dependent rect. 6 1
736 154.99 humidity 50.0 270 > th dose dependent rect. 3 4
740 155.01 radiation 40.0 90 < th dose independent rect. 5 18
753 155.07 radiation 10.0 270 < th dose dependent rect. 3 10
756 155.12 radiation 10.0 270 < th dose independent rect. 3 12
779 155.29 wind 7.0 90 < th dose independent rect. 23 6
798 155.41 radiation 20.0 10 < th dose dependent rect. 6 17
806 155.49 radiation 10.0 90 < th dose independent rect. 5 8
835 155.59 humidity 50.0 270 > th dose independent rect. 17 14
841 155.62 temperature 10.0 90 > th dose independent rect. 23 6
842 155.62 temperature 30.0 90 < th dose independent rect. 23 6
843 155.62 humidity 50.0 90 > th dose independent rect. 23 6
846 155.62 atmosphere 995.0 90 > th dose independent rect. 23 6
911 155.92 precipitation 0.1 90 < th dose independent rect. 5 18
913 155.92 precipitation 0.1 90 < th dose dependent rect. 5 18
975 156.18 wind 1.0 90 > th dose independent rect. 23 6
993 156.21 radiation 40.0 10 < th dose dependent rect. 5 5