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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os04g0197500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.07 (0.063) R2 : 0.854
β1 : 0.168 (0.228) R2dD : 0.000115 R2D : -0.109
β2 : 3.83 (0.161) R2dC : 0.194 R2C : -0.00654
β3 : -3.05 (0.232) R2dE : 0.0729 R2E : 0.0645
β4 : 3.41 (0.684) R2dD*C : 0.0077 R2D*C : -0.101
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -4.92 (0.146) R2dN8 : 0.618 R2N8 : 0.63
σ : 1.14
deviance : 599.08
__
_____
C
peak time of C : 7.62
E
wheather : temperature
threshold : 21.14
memory length : 1626
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 6.1
open length of G : 0.95

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
591.24 1.14 9.04 0.694 3.82 -3.02 3.19 2.44 -4.84 7.68 21.14 1620 6.08 1.05
599.08 1.14 9.07 0.168 3.83 -3.05 3.41 -- -4.92 7.62 21.14 1626 6.1 0.95
617.25 1.16 9.04 0.789 3.84 -3.04 -- 2.57 -4.8 7.59 21.1 1617 6.07 0.939
628.19 1.17 9.08 0.197 3.83 -3.07 -- -- -4.94 7.57 21.14 1611 6.22 0.817
1142.09 1.57 9.05 1.24 -- -2.61 -- 2.54 -4.77 -- 19.76 2628 6.13 0.952
817.56 1.34 9.29 -0.477 3.33 -- 3.79 -- -5.81 7.78 -- -- -- --
858.3 1.37 9.29 -0.384 3.34 -- -- -- -5.82 7.66 -- -- -- --
1122.46 1.56 9.21 1.1 -- -2.74 -- -- -5.06 -- 19.75 2612 6.1 1.38
629.12 1.17 9.09 -- 3.82 -3.03 -- -- -4.98 7.57 21.15 1618 6.21 0.817
1459.25 1.78 9.37 -0.338 -- -- -- -- -5.77 -- -- -- -- --
862.18 1.37 9.28 -- 3.34 -- -- -- -5.78 7.67 -- -- -- --
1143.61 1.58 9.22 -- -- -2.62 -- -- -5.15 -- 19.79 2618 6.03 1.32
1462.27 1.78 9.37 -- -- -- -- -- -5.73 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 640.09 humidity 50 14400 > th dose dependent rect. 4 3
10 648.96 humidity 50 14400 > th dose dependent rect. 2 6
16 649.98 temperature 20 1440 > th dose independent rect. 6 1
31 656.04 radiation 10 720 < th dose dependent rect. 13 2
35 656.37 temperature 20 1440 < th dose independent rect. 6 1
36 657.23 radiation 10 720 < th dose independent rect. 14 2
42 658.78 temperature 20 1440 > th dose independent rect. 5 3
46 660.18 atmosphere 995 43200 < th dose independent rect. 23 15
47 660.21 radiation 1 1440 > th dose independent rect. 12 1
49 660.33 atmosphere 995 43200 > th dose independent rect. 23 15
50 660.67 temperature 20 1440 < th dose independent rect. 22 6
51 660.75 temperature 20 1440 > th dose independent rect. 22 12
55 660.86 temperature 20 1440 < th dose independent rect. 22 12
60 661.06 atmosphere 995 43200 < th dose dependent rect. 12 21
61 661.07 temperature 20 1440 > th dose independent rect. 22 6
65 661.11 atmosphere 995 43200 < th dose independent rect. 24 13
68 661.18 radiation 10 720 < th dose dependent rect. 11 5
95 662.43 temperature 20 1440 < th dose independent rect. 3 1
113 663.00 atmosphere 995 43200 < th dose dependent sin 8 NA
115 663.03 temperature 20 1440 > th dose independent rect. 3 1
117 663.07 atmosphere 995 43200 < th dose dependent rect. 11 17
119 663.09 temperature 20 1440 < th dose independent rect. 1 3
120 663.12 temperature 20 1440 > th dose independent rect. 1 3
124 663.21 atmosphere 995 43200 < th dose independent sin 6 NA
131 663.36 atmosphere 995 43200 < th dose independent rect. 2 9
149 663.61 atmosphere 995 43200 > th dose independent rect. 2 9
164 664.06 temperature 20 1440 > th dose independent sin 7 NA
177 664.43 temperature 20 1440 < th dose independent sin 8 NA
186 664.57 atmosphere 995 43200 < th dose independent rect. 5 3
190 664.60 atmosphere 995 43200 < th dose dependent rect. 18 16
191 664.61 atmosphere 995 43200 < th dose independent rect. 4 5
192 664.62 atmosphere 995 43200 < th dose dependent rect. 2 7
193 664.63 atmosphere 995 43200 < th dose dependent rect. 21 13
197 664.65 atmosphere 995 43200 < th dose independent rect. 3 7
213 665.03 atmosphere 995 43200 > th dose independent rect. 3 7
253 665.80 atmosphere 995 43200 > th dose independent rect. 4 5
257 665.99 atmosphere 995 43200 < th dose dependent rect. 4 4
318 667.68 atmosphere 995 43200 < th dose dependent sin 17 NA
334 667.92 atmosphere 995 43200 > th dose independent sin 6 NA
354 668.37 atmosphere 995 43200 < th dose dependent rect. 12 14
387 669.17 humidity 90 14400 < th dose dependent rect. 6 1
447 670.53 atmosphere 1005 270 > th dose independent rect. 15 12
460 670.88 radiation 1 720 < th dose independent rect. 8 7
462 670.88 radiation 1 720 < th dose dependent rect. 8 7
497 671.33 atmosphere 1005 270 < th dose independent rect. 15 10
501 671.43 radiation 1 1440 < th dose independent rect. 9 4
502 671.43 radiation 1 1440 < th dose dependent rect. 9 4
534 672.18 radiation 1 1440 < th dose independent rect. 11 1
536 672.18 radiation 1 1440 < th dose dependent rect. 11 1
625 673.52 temperature 20 270 > th dose independent rect. 12 22
714 674.85 humidity 80 720 > th dose independent rect. 12 1
744 675.24 atmosphere 995 43200 < th dose dependent no NA NA
870 677.08 temperature 20 1440 > th dose independent rect. 5 23
913 677.86 temperature 20 1440 < th dose independent rect. 5 23
926 678.16 temperature 20 1440 > th dose independent no NA NA
929 678.19 atmosphere 995 43200 < th dose dependent rect. 13 11
965 678.73 temperature 20 1440 < th dose independent no NA NA
991 679.29 temperature 20 1440 < th dose dependent rect. 3 2