Os04g0194500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to ABC transporter-like protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0194500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to ABC transporter-like protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 242.81 | 0.732 | 7.61 | 1.16 | 1.63 | -1.44 | 2.13 | 0.826 | -0.267 | 16.4 | 25 | 268 | 22.7 | -- |
| 245.1 | 0.729 | 7.61 | 1.28 | 1.63 | -1.47 | 1.95 | -- | -0.249 | 16.3 | 24.98 | 266 | 22.6 | -- |
| 254.31 | 0.743 | 7.61 | 1.21 | 1.63 | -1.49 | -- | 0.612 | -0.247 | 16.3 | 25 | 264 | 22.4 | -- |
| 255.42 | 0.744 | 7.6 | 1.28 | 1.6 | -1.49 | -- | -- | -0.259 | 16.4 | 25 | 252 | 22.6 | -- |
| 277.33 | 0.776 | 7.59 | 1.34 | -- | -2.31 | -- | -0.533 | -0.266 | -- | 26.6 | 281 | 1.88 | -- |
| 300.45 | 0.813 | 7.54 | 1.53 | 2.4 | -- | 1.84 | -- | 0.104 | 17.5 | -- | -- | -- | -- |
| 308.46 | 0.822 | 7.54 | 1.52 | 2.42 | -- | -- | -- | 0.111 | 17.7 | -- | -- | -- | -- |
| 275.97 | 0.774 | 7.49 | 1.33 | -- | -2.41 | -- | -- | -0.00896 | -- | 26.6 | 253 | 1.5 | -- |
| 297.51 | 0.803 | 7.62 | -- | 1.64 | -1.67 | -- | -- | -0.447 | 16.4 | 24.6 | 242 | 22.2 | -- |
| 612.21 | 1.16 | 7.51 | 1.44 | -- | -- | -- | -- | 0.0534 | -- | -- | -- | -- | -- |
| 369.33 | 0.899 | 7.58 | -- | 2.39 | -- | -- | -- | -0.0579 | 17.7 | -- | -- | -- | -- |
| 322.63 | 0.837 | 7.57 | -- | -- | -2.52 | -- | -- | -0.198 | -- | 26.67 | 258 | 1.58 | -- |
| 667.09 | 1.21 | 7.54 | -- | -- | -- | -- | -- | -0.107 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 234.50 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 10 |
| 16 | 241.83 | temperature | 20 | 720 | < th | dose independent | rect. | 24 | 5 |
| 20 | 242.23 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 20 |
| 25 | 243.03 | temperature | 25 | 270 | < th | dose independent | sin | 5 | NA |
| 28 | 243.36 | temperature | 10 | 10 | > th | dose dependent | rect. | 6 | 22 |
| 30 | 243.47 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 18 |
| 45 | 245.22 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 10 |
| 62 | 246.24 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 14 |
| 83 | 247.57 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 10 |
| 122 | 249.73 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 4 |
| 149 | 251.11 | atmosphere | 995 | 10 | > th | dose dependent | rect. | 4 | 19 |
| 161 | 251.68 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 19 |
| 176 | 252.25 | temperature | 10 | 720 | > th | dose dependent | rect. | 5 | 4 |
| 192 | 252.71 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 10 |
| 205 | 253.19 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 10 |
| 234 | 253.89 | temperature | 25 | 270 | > th | dose independent | sin | 5 | NA |
| 241 | 254.05 | atmosphere | 1000 | 30 | > th | dose dependent | rect. | 24 | 23 |
| 257 | 254.43 | temperature | 30 | 270 | < th | dose dependent | sin | 5 | NA |
| 258 | 254.44 | temperature | 20 | 720 | < th | dose independent | sin | 9 | NA |
| 309 | 255.42 | temperature | 25 | 270 | > th | dose independent | rect. | 23 | 15 |
| 373 | 256.62 | temperature | 10 | 270 | > th | dose dependent | sin | 5 | NA |
| 406 | 257.23 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 16 |
| 412 | 257.32 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 439 | 257.57 | temperature | 10 | 270 | > th | dose dependent | rect. | 21 | 14 |
| 454 | 257.70 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 19 |
| 462 | 257.87 | temperature | 20 | 270 | > th | dose independent | rect. | 5 | 20 |
| 471 | 257.98 | humidity | 60 | 720 | > th | dose dependent | rect. | 19 | 5 |
| 508 | 258.40 | temperature | 25 | 270 | > th | dose independent | rect. | 4 | 10 |
| 509 | 258.41 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 4 |
| 530 | 258.65 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 20 |
| 535 | 258.68 | atmosphere | 995 | 270 | > th | dose dependent | rect. | 24 | 21 |
| 552 | 258.90 | temperature | 20 | 720 | > th | dose independent | rect. | 14 | 17 |
| 581 | 259.08 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 597 | 259.22 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 2 |
| 608 | 259.27 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 15 |
| 655 | 259.77 | temperature | 20 | 720 | > th | dose independent | sin | 9 | NA |
| 671 | 259.86 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 8 |
| 746 | 260.44 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 3 | 20 |
| 770 | 260.61 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 24 | 9 |
| 824 | 261.02 | humidity | 70 | 270 | > th | dose dependent | rect. | 23 | 1 |
| 859 | 261.24 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 3 |
| 875 | 261.33 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 12 |
| 887 | 261.40 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 17 |
| 904 | 261.48 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 20 |
| 961 | 261.92 | radiation | 10 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 966 | 261.95 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 10 |
| 987 | 262.10 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 24 | 20 |