Os04g0194400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transferase family protein.
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Os04g0194400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 153.02 | 0.581 | 10.4 | 0.0957 | 1.12 | 1.19 | -0.431 | 1.6 | -0.728 | 20.8 | 40 | 624 | -- | -- |
| 156.28 | 0.582 | 10.4 | 0.0521 | 1.14 | 1.22 | -0.402 | -- | -0.722 | 20.8 | 40 | 614 | -- | -- |
| 153.55 | 0.577 | 10.4 | 0.106 | 1.14 | 1.19 | -- | 1.5 | -0.724 | 20.8 | 39.9 | 612 | -- | -- |
| 156.39 | 0.582 | 10.4 | 0.0423 | 1.16 | 1.24 | -- | -- | -0.745 | 20.9 | 40 | 604 | -- | -- |
| 208.96 | 0.673 | 10.4 | 0.142 | -- | 1.64 | -- | 2.3 | -0.782 | -- | 31.04 | 679 | -- | -- |
| 188.88 | 0.644 | 10.4 | 0.0851 | 1.65 | -- | 0.335 | -- | -0.633 | 19.6 | -- | -- | -- | -- |
| 189.19 | 0.644 | 10.4 | 0.0767 | 1.65 | -- | -- | -- | -0.633 | 19.6 | -- | -- | -- | -- |
| 211.58 | 0.677 | 10.4 | -0.0282 | -- | 1.75 | -- | -- | -0.86 | -- | 30 | 679 | -- | -- |
| 156.37 | 0.582 | 10.4 | -- | 1.16 | 1.24 | -- | -- | -0.755 | 20.9 | 40 | 604 | -- | -- |
| 336.27 | 0.857 | 10.4 | 0.0538 | -- | -- | -- | -- | -0.658 | -- | -- | -- | -- | -- |
| 189.34 | 0.644 | 10.4 | -- | 1.65 | -- | -- | -- | -0.642 | 19.6 | -- | -- | -- | -- |
| 211.6 | 0.678 | 10.4 | -- | -- | 1.75 | -- | -- | -0.855 | -- | 30 | 679 | -- | -- |
| 336.34 | 0.856 | 10.4 | -- | -- | -- | -- | -- | -0.664 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 141.58 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 13 | 7 |
| 3 | 142.07 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 16 | 7 |
| 4 | 142.12 | humidity | 70.0 | 270 | > th | dose independent | rect. | 12 | 12 |
| 5 | 142.26 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 16 | 1 |
| 10 | 142.71 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 23 |
| 12 | 142.78 | humidity | 90.0 | 270 | < th | dose independent | rect. | 13 | 7 |
| 16 | 143.14 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 17 |
| 22 | 143.41 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 16 | 9 |
| 25 | 143.62 | humidity | 50.0 | 270 | > th | dose independent | rect. | 9 | 15 |
| 26 | 143.68 | radiation | 1.0 | 270 | < th | dose independent | rect. | 16 | 9 |
| 29 | 143.76 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 14 | 15 |
| 34 | 143.85 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 16 | 5 |
| 47 | 144.18 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 20 |
| 52 | 144.40 | humidity | 70.0 | 270 | > th | dose independent | rect. | 17 | 8 |
| 67 | 144.92 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 15 |
| 68 | 144.92 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 15 |
| 80 | 145.38 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 16 | 15 |
| 81 | 145.39 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 8 |
| 91 | 145.56 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 10 | 14 |
| 96 | 145.70 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 16 | 7 |
| 101 | 145.78 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 16 | 13 |
| 103 | 145.80 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 16 | 1 |
| 111 | 145.86 | wind | 7.0 | 270 | < th | dose independent | rect. | 14 | 15 |
| 112 | 145.88 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 16 | 1 |
| 122 | 145.93 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 16 | 5 |
| 129 | 146.01 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 16 | 13 |
| 145 | 146.12 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 16 | 14 |
| 155 | 146.26 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 14 | 5 |
| 159 | 146.29 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 185 | 146.64 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 17 | 8 |
| 201 | 146.89 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 23 |
| 221 | 147.12 | temperature | 25.0 | 30 | > th | dose independent | rect. | 16 | 4 |
| 224 | 147.18 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 14 | 12 |
| 246 | 147.49 | radiation | 10.0 | 270 | > th | dose independent | rect. | 16 | 2 |
| 261 | 147.57 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 19 |
| 262 | 147.57 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 19 |
| 279 | 147.82 | humidity | 70.0 | 270 | < th | dose independent | rect. | 15 | 2 |
| 307 | 148.00 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 20 |
| 310 | 148.04 | radiation | 1.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 339 | 148.36 | radiation | 1.0 | 270 | < th | dose dependent | sin | 16 | NA |
| 347 | 148.44 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 348 | 148.44 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 349 | 148.44 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 15 |
| 362 | 148.61 | humidity | 80.0 | 10 | < th | dose independent | rect. | 16 | 4 |
| 366 | 148.64 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 9 |
| 367 | 148.64 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 9 |
| 371 | 148.68 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 372 | 148.69 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 19 |
| 397 | 148.83 | humidity | 70.0 | 270 | < th | dose independent | rect. | 14 | 5 |
| 413 | 148.95 | humidity | 90.0 | 270 | < th | dose independent | rect. | 16 | 1 |
| 418 | 148.97 | temperature | 30.0 | 270 | < th | dose independent | rect. | 6 | 18 |
| 435 | 149.01 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 442 | 149.07 | radiation | 1.0 | 270 | < th | dose independent | sin | 15 | NA |
| 447 | 149.11 | radiation | 1.0 | 270 | > th | dose independent | sin | 15 | NA |
| 450 | 149.13 | humidity | 70.0 | 270 | > th | dose independent | sin | 15 | NA |
| 487 | 149.44 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 22 | 23 |
| 488 | 149.44 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 500 | 149.53 | radiation | 40.0 | 270 | < th | dose independent | rect. | 15 | 14 |
| 528 | 149.76 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 19 |
| 530 | 149.77 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 5 |
| 532 | 149.77 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 5 |
| 533 | 149.77 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 5 |
| 534 | 149.77 | radiation | 1.0 | 270 | < th | dose independent | rect. | 19 | 5 |
| 542 | 149.77 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 19 |
| 580 | 149.84 | temperature | 30.0 | 270 | < th | dose independent | rect. | 5 | 20 |
| 593 | 149.91 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 5 |
| 615 | 149.97 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 646 | 150.05 | wind | 7.0 | 270 | < th | dose independent | rect. | 13 | 6 |
| 684 | 150.25 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 10 | 14 |
| 713 | 150.45 | wind | 7.0 | 270 | < th | dose independent | rect. | 16 | 1 |
| 715 | 150.46 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 18 |
| 721 | 150.51 | radiation | 1.0 | 10 | > th | dose independent | rect. | 8 | 8 |
| 744 | 150.57 | humidity | 80.0 | 270 | < th | dose dependent | rect. | 14 | 17 |
| 760 | 150.65 | temperature | 25.0 | 270 | > th | dose dependent | sin | 16 | NA |
| 762 | 150.65 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 16 | 14 |
| 795 | 150.95 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 19 |
| 822 | 151.04 | temperature | 25.0 | 10 | > th | dose independent | rect. | 16 | 7 |
| 834 | 151.10 | wind | 7.0 | 10 | < th | dose independent | rect. | 16 | 16 |
| 844 | 151.15 | wind | 1.0 | 270 | > th | dose independent | rect. | 19 | 5 |
| 857 | 151.18 | wind | 1.0 | 270 | > th | dose independent | rect. | 11 | 9 |
| 859 | 151.19 | temperature | 25.0 | 270 | > th | dose independent | rect. | 16 | 1 |
| 871 | 151.26 | humidity | 70.0 | 270 | < th | dose independent | sin | 15 | NA |
| 904 | 151.35 | radiation | 40.0 | 270 | < th | dose independent | rect. | 19 | 20 |
| 924 | 151.44 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 7 | 9 |
| 935 | 151.50 | radiation | 1.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 964 | 151.60 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 5 |
| 966 | 151.60 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 5 |
| 976 | 151.70 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 7 |
| 977 | 151.70 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 7 |
| 978 | 151.72 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 16 | 16 |
| 979 | 151.72 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 16 | 16 |
| 996 | 151.80 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 15 |
| 999 | 151.83 | wind | 1.0 | 270 | > th | dose independent | rect. | 20 | 3 |