Os04g0191500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os04g0191500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 44.57 | 0.314 | 15.6 | -0.733 | 0.553 | 0.896 | 0.484 | -3.18 | -0.599 | 20 | 16.12 | 1576 | -- | -- |
| 52.27 | 0.337 | 15.5 | -0.239 | 0.553 | 0.951 | 0.56 | -- | -0.532 | 19.7 | 9.652 | 10349 | -- | -- |
| 45.24 | 0.313 | 15.6 | -0.736 | 0.558 | 0.895 | -- | -3.15 | -0.595 | 19.9 | 16.01 | 1539 | -- | -- |
| 53.02 | 0.339 | 15.5 | -0.272 | 0.559 | 0.96 | -- | -- | -0.53 | 19.7 | 9.371 | 10398 | -- | -- |
| 54.48 | 0.344 | 15.5 | -0.517 | -- | 1.3 | -- | -2.81 | -0.556 | -- | 15.71 | 597 | -- | -- |
| 67.34 | 0.385 | 15.4 | 0.313 | 0.559 | -- | 0.551 | -- | -0.229 | 20 | -- | -- | -- | -- |
| 68.24 | 0.387 | 15.4 | 0.298 | 0.56 | -- | -- | -- | -0.228 | 19.9 | -- | -- | -- | -- |
| 59.44 | 0.359 | 15.5 | -0.0159 | -- | 1.29 | -- | -- | -0.427 | -- | 14.17 | 629 | -- | -- |
| 53.99 | 0.342 | 15.5 | -- | 0.554 | 0.841 | -- | -- | -0.463 | 19.8 | 9.937 | 9018 | -- | -- |
| 85.31 | 0.432 | 15.4 | 0.293 | -- | -- | -- | -- | -0.235 | -- | -- | -- | -- | -- |
| 70.59 | 0.393 | 15.4 | -- | 0.558 | -- | -- | -- | -0.261 | 20 | -- | -- | -- | -- |
| 59.44 | 0.359 | 15.5 | -- | -- | 1.29 | -- | -- | -0.425 | -- | 14.19 | 626 | -- | -- |
| 87.57 | 0.437 | 15.4 | -- | -- | -- | -- | -- | -0.268 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 43.87 | temperature | 15 | 1440 | > th | dose dependent | rect. | 14 | 13 |
| 24 | 44.05 | temperature | 15 | 1440 | > th | dose dependent | sin | 16 | NA |
| 48 | 44.17 | temperature | 30 | 1440 | < th | dose dependent | rect. | 14 | 13 |
| 98 | 44.31 | temperature | 30 | 1440 | < th | dose dependent | sin | 16 | NA |
| 159 | 44.43 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 4 |
| 204 | 44.52 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 219 | 44.54 | temperature | 15 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 340 | 44.71 | humidity | 90 | 14400 | > th | dose dependent | rect. | 24 | 17 |
| 405 | 44.79 | temperature | 15 | 1440 | > th | dose dependent | no | NA | NA |
| 416 | 44.80 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 427 | 44.81 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 23 |
| 474 | 44.86 | temperature | 15 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 500 | 44.88 | temperature | 15 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 556 | 44.95 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 569 | 44.95 | temperature | 30 | 1440 | < th | dose dependent | rect. | 2 | 23 |
| 589 | 44.97 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 620 | 45.01 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 621 | 45.01 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 896 | 45.39 | humidity | 90 | 14400 | > th | dose dependent | sin | 4 | NA |
| 925 | 45.43 | humidity | 70 | 43200 | < th | dose dependent | rect. | 16 | 7 |
| 938 | 45.44 | temperature | 25 | 4320 | < th | dose dependent | rect. | 9 | 1 |
| 940 | 45.44 | humidity | 70 | 43200 | < th | dose dependent | rect. | 15 | 9 |
| 970 | 45.48 | humidity | 60 | 43200 | > th | dose independent | rect. | 19 | 14 |