Os04g0180400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cytochrome P450 CYP99A1 (EC 1.14.-.-) (Fragment).
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Os04g0180400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cytochrome P450 CYP99A1 (EC 1.14.-.-) (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 662.75 | 1.21 | 8.22 | 3.38 | 1.26 | 1.01 | 0.392 | 18.7 | 1.34 | 1.86 | 5.3 | 1553 | 0.0251 | -- |
| 773.73 | 1.3 | 7.91 | 3.25 | 1.35 | -0.553 | 1.47 | -- | 1.75 | 2.04 | 3.701 | 7333 | 1.65 | -- |
| 663.22 | 1.2 | 8.22 | 3.36 | 1.26 | 1.06 | -- | 19.1 | 1.34 | 1.79 | 5.391 | 1552 | 0.233 | -- |
| 757.99 | 1.28 | 7.9 | 3.04 | 1.39 | -1.15 | -- | -- | 1.81 | 2 | 5.4 | 5932 | 2.46 | -- |
| 759.19 | 1.28 | 8.22 | 3.41 | -- | 1.22 | -- | 19.4 | 1.36 | -- | 5.4 | 1553 | 0.333 | -- |
| 786.81 | 1.32 | 7.97 | 3.45 | 1.25 | -- | 0.585 | -- | 1.61 | 1.94 | -- | -- | -- | -- |
| 788.06 | 1.31 | 7.98 | 3.44 | 1.25 | -- | -- | -- | 1.61 | 1.83 | -- | -- | -- | -- |
| 815.89 | 1.33 | 8.02 | 3.63 | -- | -1.56 | -- | -- | 1.53 | -- | 9.201 | 2460 | 2.17 | -- |
| 874.6 | 1.38 | 8.17 | -- | 1.21 | -2.7 | -- | -- | 0.642 | 1.21 | 5.434 | 47520 | 2.25 | -- |
| 882.15 | 1.39 | 7.96 | 3.49 | -- | -- | -- | -- | 1.64 | -- | -- | -- | -- | -- |
| 1099.17 | 1.55 | 8.06 | -- | 1.31 | -- | -- | -- | 1.23 | 1.91 | -- | -- | -- | -- |
| 951.47 | 1.44 | 8.19 | -- | -- | -2.7 | -- | -- | 0.612 | -- | 5.917 | 47520 | 1.24e-05 | -- |
| 1202.87 | 1.62 | 8.05 | -- | -- | -- | -- | -- | 1.25 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 652.64 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 2 | 652.93 | atmosphere | 1000 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 8 | 653.58 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 16 | 8 |
| 9 | 653.59 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 30 | 654.84 | atmosphere | 1000 | 14400 | < th | dose independent | rect. | 17 | 7 |
| 48 | 655.67 | atmosphere | 1000 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 110 | 657.92 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 16 | 2 |
| 114 | 658.21 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 158 | 659.90 | atmosphere | 1000 | 14400 | > th | dose independent | sin | 15 | NA |
| 169 | 660.57 | atmosphere | 1005 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 197 | 661.22 | atmosphere | 1000 | 14400 | < th | dose independent | sin | 15 | NA |
| 228 | 661.99 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 287 | 663.18 | atmosphere | 1000 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 296 | 663.39 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 5 | 9 |
| 297 | 663.41 | wind | 5 | 1440 | > th | dose independent | rect. | 7 | 2 |
| 353 | 664.39 | atmosphere | 1005 | 14400 | < th | dose dependent | sin | 13 | NA |
| 432 | 665.71 | wind | 5 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 439 | 665.83 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 4 | 13 |
| 456 | 666.08 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 480 | 666.36 | wind | 5 | 1440 | > th | dose dependent | rect. | 7 | 2 |
| 496 | 666.56 | wind | 5 | 1440 | > th | dose independent | sin | 6 | NA |
| 497 | 666.56 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 5 | 9 |
| 506 | 666.63 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 9 | 4 |
| 532 | 666.95 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 4 | 13 |
| 552 | 667.15 | atmosphere | 1005 | 14400 | > th | dose independent | sin | 3 | NA |
| 557 | 667.17 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 659 | 668.31 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 24 | 17 |
| 697 | 668.64 | atmosphere | 1005 | 14400 | < th | dose independent | sin | 3 | NA |
| 714 | 668.78 | wind | 5 | 1440 | < th | dose independent | sin | 6 | NA |
| 727 | 668.92 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 9 | 4 |
| 741 | 669.02 | wind | 5 | 1440 | > th | dose independent | rect. | 21 | 16 |
| 748 | 669.08 | humidity | 90 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 959 | 670.68 | humidity | 90 | 1440 | > th | dose independent | rect. | 24 | 1 |
| 1000 | 670.94 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 4 | 21 |