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Os04g0178400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Cytochrome P450 CYP99A1 (EC 1.14.-.-) (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.61 (0.301) R2 : 0.625
β1 : -6.71 (0.917) R2dD : 3.57 R2D : -14.6
β2 : 1.23 (0.0748) R2dC : 0.229 R2C : -9.71
β3 : -107 (12.6) R2dE : 358 R2E : -353
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -322 (38.2) R2dD*E : 344 R2D*E : -348
γ1 : 0.905 (0.061) R2dN8 : 0.246 R2N8 : -8.48
σ : 0.53
deviance : 129.56
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C
peak time of C : 5.61
E
wheather : radiation
threshold : 1.833
memory length : 1306
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 10.9
open length of G : 0.963

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
130.62 0.537 7.56 -6.9 1.24 -107 -0.209 -322 0.901 5.63 1.668 1332 11 0.919
175.49 0.622 10.1 1.2 1.14 -0.0687 0.427 -- 0.984 5.66 0.003583 142 11.1 2.65
129.56 0.53 7.61 -6.71 1.23 -107 -- -322 0.905 5.61 1.833 1306 10.9 0.963
159.73 0.589 10.1 0.966 1.34 -0.904 -- -- 0.9 5.77 0.001439 1214 10.5 3.18
208.28 0.672 7.66 -6.57 -- -106 -- -317 0.931 -- 2.809 1253 10.7 0.756
175.5 0.621 10.1 1.2 1.14 -- 0.426 -- 0.984 5.66 -- -- -- --
175.94 0.621 10.1 1.2 1.15 -- -- -- 0.982 5.68 -- -- -- --
222.5 0.695 10.1 1.01 -- -1.19 -- -- 0.925 -- 0.001662 1209 10.6 3.06
183.16 0.63 10.2 -- 1.36 -1.27 -- -- 0.887 5.54 0.3007 1340 10.5 3.15
244.11 0.73 10.1 1.24 -- -- -- -- 1.01 -- -- -- -- --
213.86 0.684 10.1 -- 1.17 -- -- -- 0.849 5.64 -- -- -- --
244.85 0.729 10.2 -- -- -1.44 -- -- 0.926 -- 4.028 1252 10.9 1.37
284.4 0.787 10.2 -- -- -- -- -- 0.872 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 140.32 radiation 1.0 1440 < th dose independent rect. 11 1
2 140.32 radiation 1.0 1440 < th dose dependent rect. 11 1
3 142.43 precipitation 0.1 270 > th dose dependent rect. 2 2
4 142.48 precipitation 0.1 270 > th dose independent rect. 2 2
5 145.88 radiation 1.0 1440 < th dose independent rect. 13 2
6 145.88 radiation 1.0 1440 < th dose dependent rect. 13 2
7 146.56 radiation 1.0 1440 < th dose dependent rect. 11 5
10 146.79 temperature 20.0 10 > th dose independent rect. 24 6
11 146.84 temperature 20.0 90 > th dose independent rect. 23 7
12 146.92 radiation 1.0 1440 < th dose independent rect. 10 5
19 147.10 radiation 1.0 1440 > th dose independent rect. 13 1
31 147.87 temperature 20.0 270 > th dose independent rect. 22 5
35 148.20 precipitation 0.1 270 > th dose dependent rect. 24 4
36 148.21 precipitation 0.1 270 > th dose independent rect. 24 4
48 148.61 humidity 70.0 14400 > th dose dependent rect. 24 1
56 148.77 humidity 70.0 14400 > th dose dependent rect. 23 3
58 148.79 humidity 90.0 14400 < th dose dependent rect. 23 2
77 149.26 radiation 1.0 1440 > th dose independent rect. 8 7
97 149.71 humidity 70.0 14400 > th dose dependent rect. 22 9
167 150.79 radiation 1.0 1440 > th dose independent rect. 9 1
188 151.25 temperature 20.0 90 > th dose independent rect. 12 18
207 151.60 temperature 20.0 10 > th dose independent rect. 12 18
237 152.16 temperature 20.0 270 > th dose independent rect. 10 20
239 152.18 temperature 20.0 270 > th dose independent rect. 10 17
267 152.66 temperature 20.0 270 > th dose independent rect. 10 22
284 152.88 humidity 90.0 14400 < th dose independent rect. 22 9
293 152.98 temperature 20.0 10 > th dose independent rect. 13 15
312 153.19 humidity 90.0 14400 > th dose dependent rect. 6 1
329 153.44 humidity 90.0 14400 < th dose independent rect. 2 5
354 153.72 temperature 20.0 270 > th dose independent rect. 21 19
358 153.83 radiation 40.0 43200 > th dose independent rect. 15 1
378 153.86 radiation 30.0 43200 < th dose independent rect. 17 8
394 154.05 temperature 10.0 270 > th dose dependent rect. 21 6
401 154.13 humidity 90.0 14400 < th dose independent rect. 23 1
413 154.30 humidity 90.0 14400 < th dose independent rect. 22 5
414 154.31 humidity 90.0 14400 < th dose independent rect. 22 3
444 154.59 atmosphere 1005.0 10 < th dose dependent rect. 24 8
466 154.75 humidity 80.0 14400 > th dose dependent sin 10 NA
484 154.91 temperature 20.0 1440 > th dose independent rect. 1 10
496 154.99 temperature 20.0 1440 > th dose independent rect. 23 13
501 155.02 temperature 20.0 1440 > th dose independent rect. 23 16
514 155.13 wind 7.0 4320 > th dose independent rect. 17 3
522 155.16 temperature 20.0 1440 > th dose independent rect. 1 14
527 155.17 temperature 20.0 1440 < th dose independent rect. 1 10
528 155.17 temperature 20.0 1440 < th dose independent rect. 23 13
530 155.18 temperature 20.0 1440 < th dose independent rect. 23 16
531 155.19 wind 7.0 4320 > th dose independent rect. 17 1
536 155.20 humidity 60.0 14400 > th dose dependent rect. 5 1
549 155.24 temperature 20.0 1440 > th dose independent sin 5 NA
564 155.29 humidity 50.0 270 > th dose dependent rect. 3 18
580 155.36 humidity 90.0 14400 > th dose independent rect. 4 3
596 155.42 temperature 20.0 1440 < th dose independent sin 5 NA
599 155.43 temperature 20.0 1440 < th dose independent rect. 1 14
639 155.60 temperature 20.0 90 > th dose independent rect. 23 19
653 155.67 humidity 90.0 14400 > th dose independent rect. 22 4
686 155.82 humidity 90.0 14400 > th dose independent rect. 22 9
703 155.93 humidity 90.0 14400 < th dose independent sin 9 NA
716 155.99 temperature 20.0 10 > th dose independent rect. 10 18
727 156.03 wind 1.0 14400 > th dose independent rect. 23 3
739 156.10 wind 9.0 43200 > th dose dependent rect. 12 2
750 156.14 wind 7.0 4320 < th dose independent rect. 17 3
769 156.20 wind 7.0 4320 > th dose independent rect. 15 6
781 156.23 temperature 20.0 1440 > th dose independent rect. 5 2
784 156.23 wind 9.0 43200 > th dose dependent rect. 15 1
788 156.25 humidity 50.0 43200 > th dose independent rect. 11 1
806 156.31 humidity 60.0 14400 > th dose independent rect. 5 3
822 156.36 temperature 20.0 720 < th dose independent rect. 10 20
826 156.38 humidity 50.0 43200 < th dose independent rect. 11 1
829 156.39 humidity 60.0 43200 > th dose independent rect. 8 1
848 156.44 humidity 90.0 14400 > th dose independent rect. 1 1
859 156.47 wind 7.0 4320 > th dose dependent rect. 15 1
868 156.50 temperature 20.0 1440 < th dose independent rect. 5 2
882 156.54 humidity 70.0 14400 < th dose dependent rect. 21 10
886 156.55 temperature 20.0 720 < th dose independent rect. 14 16
899 156.58 humidity 50.0 14400 < th dose dependent rect. 9 2
916 156.65 temperature 20.0 1440 > th dose independent rect. 3 1
925 156.67 wind 1.0 270 < th dose independent rect. 3 1
980 156.75 wind 7.0 4320 < th dose independent rect. 15 6
984 156.77 temperature 20.0 720 > th dose independent sin 12 NA
988 156.77 temperature 20.0 720 > th dose independent rect. 17 23
990 156.78 humidity 60.0 43200 < th dose independent rect. 8 1
994 156.79 humidity 70.0 90 > th dose independent rect. 4 19