Os04g0177100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF26 domain containing protein.
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Os04g0177100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF26 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 234.41 | 0.719 | 3.28 | -0.175 | 0.248 | 0.759 | 1.29 | -0.623 | 0.0515 | 5.24 | 24.6 | 735 | -- | -- |
| 234.82 | 0.714 | 3.29 | -0.274 | 0.26 | 0.841 | 1.24 | -- | 0.031 | 5 | 24.1 | 775 | -- | -- |
| 238.41 | 0.719 | 3.28 | -0.192 | 0.275 | 0.773 | -- | -0.485 | 0.0409 | 5.41 | 24.5 | 826 | -- | -- |
| 238.66 | 0.72 | 3.29 | -0.274 | 0.266 | 0.843 | -- | -- | 0.0187 | 5.47 | 24 | 801 | -- | -- |
| 241.77 | 0.724 | 3.29 | -0.204 | -- | 0.815 | -- | -0.374 | 0.0537 | -- | 25.18 | 650 | -- | -- |
| 245.44 | 0.734 | 3.33 | -0.516 | 0.282 | -- | 1.23 | -- | -0.136 | 5.55 | -- | -- | -- | -- |
| 248.64 | 0.738 | 3.33 | -0.508 | 0.305 | -- | -- | -- | -0.14 | 6.7 | -- | -- | -- | -- |
| 239.8 | 0.721 | 3.3 | -0.299 | -- | 0.943 | -- | -- | 0.00233 | -- | 33.6 | 429 | -- | -- |
| 240.37 | 0.722 | 3.28 | -- | 0.269 | 0.957 | -- | -- | 0.067 | 5.35 | 24 | 826 | -- | -- |
| 253.5 | 0.744 | 3.33 | -0.501 | -- | -- | -- | -- | -0.134 | -- | -- | -- | -- | -- |
| 255.45 | 0.748 | 3.31 | -- | 0.299 | -- | -- | -- | -0.0838 | 6.8 | -- | -- | -- | -- |
| 241.97 | 0.724 | 3.29 | -- | -- | 1.05 | -- | -- | 0.0455 | -- | 35.98 | 457 | -- | -- |
| 260.13 | 0.753 | 3.32 | -- | -- | -- | -- | -- | -0.0787 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 229.03 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 5 | 229.48 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 5 | 18 |
| 8 | 229.84 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 5 | 22 |
| 9 | 229.92 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 5 | 4 |
| 23 | 231.64 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 11 | 11 |
| 24 | 231.67 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 8 | 2 |
| 29 | 231.75 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 3 | 9 |
| 30 | 231.81 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 14 | 21 |
| 32 | 231.83 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 7 | 5 |
| 40 | 232.01 | atmosphere | 1010.0 | 270 | > th | dose independent | rect. | 8 | 1 |
| 42 | 232.06 | temperature | 25.0 | 270 | < th | dose dependent | sin | 1 | NA |
| 45 | 232.13 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 13 |
| 66 | 232.32 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 18 | 18 |
| 74 | 232.46 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 7 | 13 |
| 83 | 232.50 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 24 | 13 |
| 84 | 232.50 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 24 | 21 |
| 94 | 232.56 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 98 | 232.59 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 3 | 13 |
| 124 | 232.68 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 11 | 19 |
| 139 | 232.76 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 1 | 10 |
| 167 | 232.86 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 21 | 20 |
| 169 | 232.87 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 173 | 232.90 | temperature | 20.0 | 270 | < th | dose independent | rect. | 8 | 1 |
| 194 | 232.96 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 1 | 1 |
| 195 | 232.96 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 5 | 6 |
| 206 | 233.00 | wind | 5.0 | 270 | > th | dose independent | rect. | 10 | 3 |
| 278 | 233.21 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 16 |
| 345 | 233.36 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 2 | 7 |
| 366 | 233.41 | temperature | 25.0 | 30 | < th | dose independent | rect. | 10 | 3 |
| 381 | 233.43 | temperature | 25.0 | 10 | < th | dose independent | rect. | 12 | 1 |
| 409 | 233.47 | wind | 3.0 | 270 | > th | dose dependent | rect. | 10 | 3 |
| 566 | 233.83 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 24 | 5 |
| 619 | 233.93 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 14 | 19 |
| 671 | 234.04 | temperature | 25.0 | 30 | < th | dose independent | rect. | 3 | 10 |
| 717 | 234.11 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 1 | 10 |
| 728 | 234.13 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 14 |
| 775 | 234.20 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 18 | 17 |
| 778 | 234.20 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 780 | 234.21 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 812 | 234.24 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 23 | 8 |
| 832 | 234.26 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 23 | 8 |
| 835 | 234.26 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 23 | 8 |
| 842 | 234.27 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 23 | 8 |
| 853 | 234.30 | atmosphere | 1010.0 | 270 | > th | dose independent | sin | 3 | NA |