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Os04g0176100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.04 (0.064) R2 : 0.695
β1 : 5.79 (0.306) R2dD : 0.512 R2D : 0.0547
β2 : 2.34 (0.145) R2dC : 0.184 R2C : 0.209
β3 : -4.24 (0.243) R2dE : 0.26 R2E : 0.0908
β4 : 2.36 (0.598) R2dD*C : 0.0121 R2D*C : -0.0543
β5 : 7.31 (1.21) R2dD*E : 0.0527 R2D*E : -0.222
γ1 : 1.82 (0.144) R2dN8 : 0.193 R2N8 : -0.079
σ : 1.1
deviance : 547.15
__
_____
C
peak time of C : 21.8
E
wheather : temperature
threshold : 20.5
memory length : 40
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
547.15 1.1 7.04 5.79 2.34 -4.24 2.36 7.31 1.82 21.8 20.5 40 -- --
592.32 1.14 7.19 4.46 2.25 -3.75 0.956 -- 1.45 22 20.1 31 -- --
566.11 1.11 7.08 5.53 2.46 -3.98 -- 6.05 1.73 21.9 20.6 50 -- --
592.58 1.13 7.19 4.45 2.37 -3.74 -- -- 1.44 22.1 19.55 41 -- --
841.73 1.36 6.98 5.59 -- -5.1 -- 5.6 1.89 -- 20.33 11 -- --
798.42 1.32 7.33 3.66 3.12 -- 0.485 -- 0.807 23.7 -- -- -- --
799.41 1.32 7.33 3.64 3.12 -- -- -- 0.805 23.7 -- -- -- --
865.49 1.37 7.08 4.78 -- -5.26 -- -- 1.66 -- 17.76 6 -- --
1069.56 1.53 7.35 -- 2.58 -2.18 -- -- 0.719 23 20.6 36 -- --
1410.72 1.76 7.26 3.73 -- -- -- -- 0.843 -- -- -- -- --
1147.86 1.58 7.43 -- 3.16 -- -- -- 0.4 23.8 -- -- -- --
1419.09 1.76 7.24 -- -- -3.88 -- -- 0.961 -- 20.41 3 -- --
1776.89 1.97 7.36 -- -- -- -- -- 0.429 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 533.56 wind 9.0 43200 > th dose dependent rect. 19 2
2 535.83 wind 5.0 43200 > th dose dependent rect. 19 2
6 543.19 wind 9.0 43200 > th dose independent rect. 19 2
8 544.27 radiation 1.0 43200 < th dose dependent rect. 21 7
11 546.25 wind 9.0 43200 < th dose independent rect. 19 2
18 549.37 temperature 20.0 30 > th dose dependent no NA NA
22 550.44 temperature 20.0 30 > th dose dependent rect. 4 23
24 551.25 precipitation 0.1 43200 > th dose independent rect. 17 1
29 552.22 precipitation 0.1 43200 < th dose independent rect. 17 1
30 552.22 precipitation 0.1 43200 < th dose dependent rect. 17 1
32 552.52 wind 5.0 43200 < th dose independent rect. 19 2
45 555.52 temperature 20.0 10 > th dose dependent rect. 8 23
47 556.50 temperature 20.0 30 > th dose dependent rect. 2 23
49 557.08 wind 5.0 43200 > th dose independent rect. 17 5
54 558.14 wind 7.0 43200 < th dose independent rect. 17 4
59 558.75 humidity 80.0 14400 > th dose independent rect. 17 1
63 559.33 temperature 20.0 90 > th dose dependent rect. 6 23
65 559.57 temperature 20.0 90 > th dose dependent rect. 20 23
67 560.42 wind 9.0 43200 > th dose dependent rect. 19 11
68 560.77 temperature 20.0 90 > th dose dependent rect. 15 23
74 561.57 radiation 1.0 43200 < th dose dependent rect. 1 1
76 562.66 humidity 80.0 43200 > th dose independent rect. 23 1
79 563.62 precipitation 0.1 43200 > th dose dependent rect. 17 1
83 564.35 wind 9.0 43200 > th dose dependent rect. 19 6
87 564.90 humidity 80.0 14400 < th dose independent rect. 17 1
89 565.65 wind 5.0 43200 > th dose independent rect. 5 17
90 565.71 wind 5.0 43200 > th dose dependent rect. 15 7
94 566.00 wind 5.0 43200 < th dose independent rect. 4 18
107 567.38 wind 5.0 43200 < th dose independent rect. 15 17
111 567.61 temperature 20.0 90 > th dose dependent rect. 22 23
136 568.85 wind 5.0 43200 < th dose independent rect. 14 22
140 569.00 wind 5.0 43200 > th dose independent rect. 15 17
146 569.19 temperature 20.0 10 > th dose dependent rect. 22 23
171 569.97 temperature 20.0 10 > th dose dependent rect. 24 23
173 570.06 wind 5.0 43200 > th dose dependent sin 16 NA
177 570.23 wind 5.0 43200 < th dose independent rect. 14 20
191 570.82 wind 5.0 43200 > th dose independent rect. 14 22
203 571.08 wind 3.0 43200 > th dose dependent rect. 3 19
204 571.10 wind 7.0 43200 < th dose independent rect. 15 6
205 571.10 humidity 80.0 14400 > th dose dependent rect. 18 1
206 571.13 wind 7.0 43200 > th dose independent rect. 15 1
220 571.42 wind 5.0 43200 < th dose independent rect. 9 23
224 571.48 wind 5.0 43200 > th dose independent rect. 14 20
230 571.61 wind 5.0 43200 < th dose independent rect. 11 23
234 571.68 wind 7.0 43200 < th dose independent rect. 15 1
238 571.74 wind 5.0 43200 > th dose dependent rect. 13 19
240 571.84 wind 5.0 43200 > th dose dependent rect. 5 16
243 571.96 wind 9.0 43200 > th dose dependent rect. 17 13
253 572.09 wind 5.0 43200 > th dose independent rect. 9 23
311 572.89 wind 3.0 43200 > th dose dependent rect. 24 22
321 573.12 wind 5.0 43200 < th dose independent no NA NA
330 573.23 wind 5.0 43200 > th dose independent sin 15 NA
346 573.46 temperature 30.0 90 < th dose dependent rect. 11 23
361 573.70 wind 9.0 43200 < th dose dependent rect. 20 1
370 573.84 radiation 1.0 1440 < th dose dependent sin 13 NA
376 574.00 wind 5.0 43200 < th dose independent sin 14 NA
380 574.06 humidity 90.0 14400 < th dose independent rect. 21 1
394 574.21 temperature 20.0 90 > th dose dependent rect. 13 23
402 574.32 wind 5.0 43200 > th dose independent no NA NA
417 574.48 wind 3.0 43200 > th dose dependent rect. 14 22
444 574.84 radiation 1.0 1440 < th dose dependent rect. 15 21
464 575.09 wind 3.0 43200 > th dose dependent rect. 11 23
471 575.16 radiation 1.0 1440 < th dose dependent rect. 7 23
475 575.22 radiation 1.0 1440 < th dose dependent rect. 15 17
476 575.22 temperature 10.0 270 > th dose dependent rect. 4 23
482 575.26 wind 3.0 43200 > th dose dependent rect. 6 1
502 575.47 wind 9.0 43200 > th dose dependent rect. 17 6
524 575.76 wind 3.0 43200 > th dose dependent rect. 17 23
537 575.86 wind 3.0 43200 > th dose dependent rect. 9 23
558 576.07 wind 5.0 43200 < th dose independent rect. 20 23
560 576.09 wind 3.0 43200 > th dose dependent no NA NA
579 576.32 wind 3.0 43200 > th dose dependent rect. 20 23
583 576.39 wind 5.0 43200 < th dose independent rect. 18 23
611 576.70 wind 5.0 43200 > th dose independent rect. 15 13
614 576.75 wind 9.0 43200 > th dose independent rect. 19 6
619 576.78 temperature 20.0 10 > th dose dependent rect. 13 23
638 576.99 radiation 1.0 1440 < th dose dependent rect. 4 18
642 577.02 wind 5.0 43200 > th dose dependent rect. 10 17
680 577.28 radiation 1.0 1440 < th dose dependent rect. 9 23
687 577.35 wind 7.0 43200 < th dose independent rect. 14 13
704 577.46 wind 9.0 43200 > th dose dependent rect. 17 8
714 577.50 radiation 1.0 1440 < th dose dependent no NA NA
727 577.59 wind 5.0 43200 > th dose independent rect. 20 23
740 577.65 radiation 1.0 1440 < th dose dependent rect. 20 23
744 577.67 wind 5.0 43200 > th dose independent sin 0 NA
764 577.82 wind 5.0 43200 > th dose independent rect. 17 23
776 577.89 temperature 20.0 30 > th dose dependent rect. 17 23
792 577.97 wind 3.0 43200 > th dose dependent rect. 3 15
818 578.19 wind 5.0 43200 < th dose independent sin 0 NA
838 578.40 wind 7.0 43200 < th dose independent rect. 14 11
844 578.45 temperature 20.0 270 > th dose dependent rect. 17 23
856 578.57 wind 9.0 43200 > th dose independent rect. 19 9
888 578.83 wind 9.0 43200 > th dose independent rect. 19 11
907 579.01 precipitation 0.1 43200 > th dose dependent rect. 19 2
947 579.38 wind 3.0 43200 > th dose dependent sin 1 NA
965 579.57 temperature 30.0 10 < th dose dependent rect. 1 23
971 579.68 temperature 20.0 14400 > th dose dependent rect. 17 1
988 579.84 temperature 30.0 90 < th dose dependent rect. 23 23