Os04g0174200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os04g0174200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 165.44 | 0.604 | 3.22 | -0.255 | 0.73 | -0.707 | 0.0409 | 2.2 | 0.77 | 6.8 | 31.51 | 1466 | -- | -- |
| 165.87 | 0.6 | 3.19 | 0.0823 | 0.709 | -0.448 | -0.0639 | -- | 0.747 | 6.89 | 32.3 | 1430 | -- | -- |
| 165.44 | 0.599 | 3.22 | -0.255 | 0.731 | -0.708 | -- | 2.2 | 0.77 | 6.8 | 31.51 | 1465 | -- | -- |
| 165.71 | 0.6 | 3.18 | 0.136 | 0.726 | -0.442 | -- | -- | 0.762 | 6.78 | 32.2 | 1430 | -- | -- |
| 193.36 | 0.648 | 3.23 | -0.185 | -- | -0.698 | -- | 2.06 | 0.786 | -- | 31.8 | 1454 | -- | -- |
| 175.78 | 0.622 | 3.2 | 0.26 | 0.74 | -- | 0.071 | -- | 0.677 | 6.56 | -- | -- | -- | -- |
| 175.79 | 0.621 | 3.2 | 0.261 | 0.741 | -- | -- | -- | 0.676 | 6.56 | -- | -- | -- | -- |
| 193.17 | 0.647 | 3.19 | 0.151 | -- | -0.462 | -- | -- | 0.785 | -- | 32.26 | 1430 | -- | -- |
| 166.2 | 0.6 | 3.18 | -- | 0.728 | -0.456 | -- | -- | 0.753 | 6.82 | 32.24 | 1430 | -- | -- |
| 204.34 | 0.668 | 3.21 | 0.279 | -- | -- | -- | -- | 0.692 | -- | -- | -- | -- | -- |
| 177.59 | 0.623 | 3.21 | -- | 0.744 | -- | -- | -- | 0.647 | 6.54 | -- | -- | -- | -- |
| 193.73 | 0.648 | 3.2 | -- | -- | -0.483 | -- | -- | 0.773 | -- | 32.25 | 1426 | -- | -- |
| 206.4 | 0.671 | 3.22 | -- | -- | -- | -- | -- | 0.661 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 151.19 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 5 | 2 |
| 2 | 151.42 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 6 | 151.60 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 8 | 151.65 | wind | 5.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 9 | 151.79 | radiation | 1.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 13 | 151.87 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 15 | 151.90 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 18 | 151.97 | wind | 3.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 21 | 152.01 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 24 | 152.15 | wind | 9.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 25 | 152.15 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 29 | 152.15 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 33 | 152.15 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 38 | 152.15 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 39 | 152.15 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 40 | 152.15 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 43 | 152.18 | humidity | 80.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 48 | 152.23 | temperature | 10.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 50 | 152.23 | temperature | 30.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 51 | 152.23 | humidity | 50.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 55 | 152.23 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 56 | 152.23 | radiation | 20.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 59 | 152.23 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 6 | 1 |
| 60 | 152.23 | temperature | 10.0 | 30 | > th | dose independent | rect. | 7 | 23 |
| 61 | 152.23 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 62 | 152.25 | wind | 1.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 63 | 152.27 | humidity | 90.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 68 | 152.58 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 70 | 152.63 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 110 | 153.71 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 7 | 23 |
| 117 | 153.97 | wind | 9.0 | 30 | < th | dose independent | rect. | 7 | 23 |
| 120 | 154.37 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 121 | 154.40 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 7 | 23 |
| 122 | 154.40 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 125 | 154.60 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 127 | 154.76 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 2 | 5 |
| 131 | 155.31 | wind | 1.0 | 30 | > th | dose independent | rect. | 7 | 23 |
| 142 | 155.91 | wind | 3.0 | 30 | < th | dose dependent | rect. | 4 | 3 |
| 149 | 156.44 | wind | 1.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 154 | 156.98 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 156 | 157.13 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 18 | 13 |
| 168 | 157.15 | humidity | 50.0 | 30 | > th | dose independent | rect. | 7 | 23 |
| 171 | 157.45 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 177 | 157.83 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 187 | 158.17 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 211 | 158.84 | radiation | 1.0 | 90 | > th | dose independent | rect. | 18 | 13 |
| 242 | 159.17 | wind | 3.0 | 30 | < th | dose dependent | rect. | 4 | 5 |
| 252 | 159.49 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 5 | 1 |
| 257 | 159.52 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 267 | 159.64 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 2 | 5 |
| 342 | 159.86 | humidity | 80.0 | 30 | > th | dose independent | rect. | 4 | 3 |
| 352 | 160.00 | temperature | 30.0 | 30 | < th | dose independent | rect. | 7 | 23 |
| 367 | 160.26 | temperature | 25.0 | 30 | > th | dose independent | rect. | 1 | 6 |
| 394 | 160.62 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 419 | 160.97 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 3 |
| 422 | 160.97 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 3 |
| 426 | 160.99 | wind | 9.0 | 30 | < th | dose independent | rect. | 7 | 21 |
| 430 | 161.02 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 3 |
| 432 | 161.02 | temperature | 30.0 | 30 | < th | dose independent | rect. | 4 | 3 |
| 433 | 161.02 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 3 |
| 436 | 161.02 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 3 |
| 437 | 161.02 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 4 | 3 |
| 441 | 161.02 | temperature | 10.0 | 30 | > th | dose independent | rect. | 7 | 21 |
| 447 | 161.07 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 7 | 21 |
| 459 | 161.26 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 7 | 21 |
| 460 | 161.26 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 7 | 21 |
| 466 | 161.40 | humidity | 80.0 | 30 | > th | dose independent | rect. | 4 | 9 |
| 494 | 161.71 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 4 | 3 |
| 507 | 161.85 | wind | 3.0 | 30 | < th | dose independent | rect. | 4 | 5 |
| 511 | 161.88 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 554 | 162.27 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 569 | 162.40 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 5 | 1 |
| 587 | 162.52 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 4 | 9 |
| 668 | 162.80 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 19 | 11 |
| 680 | 162.81 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 711 | 162.91 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 7 | 21 |
| 713 | 162.91 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 722 | 162.96 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 7 | 23 |
| 724 | 162.97 | temperature | 20.0 | 90 | > th | dose independent | rect. | 4 | 15 |
| 727 | 162.98 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 20 |
| 757 | 163.09 | humidity | 70.0 | 720 | < th | dose independent | rect. | 19 | 1 |
| 792 | 163.15 | wind | 1.0 | 30 | > th | dose independent | rect. | 9 | 21 |
| 804 | 163.23 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 12 |
| 812 | 163.25 | humidity | 50.0 | 30 | > th | dose independent | rect. | 7 | 21 |
| 816 | 163.26 | radiation | 10.0 | 90 | < th | dose independent | rect. | 4 | 15 |
| 824 | 163.30 | radiation | 10.0 | 90 | < th | dose independent | rect. | 4 | 8 |
| 833 | 163.32 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 9 |
| 856 | 163.40 | wind | 9.0 | 90 | < th | dose dependent | rect. | 17 | 14 |
| 857 | 163.41 | humidity | 90.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 881 | 163.52 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 4 | 5 |
| 932 | 163.70 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 4 | 3 |
| 955 | 163.83 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 10 |
| 956 | 163.84 | temperature | 30.0 | 720 | < th | dose independent | rect. | 18 | 1 |
| 957 | 163.84 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 963 | 163.86 | temperature | 25.0 | 10 | > th | dose independent | rect. | 1 | 8 |
| 976 | 163.90 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 978 | 163.90 | wind | 9.0 | 90 | < th | dose dependent | rect. | 15 | 16 |