Os04g0173800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Lectin precursor (Agglutinin).
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Os04g0173800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Lectin precursor (Agglutinin).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 121.11 | 0.517 | 3.06 | -0.205 | 0.124 | 7.55 | 0.0281 | -17.5 | 0.0165 | 8.72 | 0.3996 | 10 | 11.7 | -- |
| 144.58 | 0.564 | 3.02 | -0.157 | 0.0765 | 0.874 | -0.679 | -- | -0.0171 | 3.82 | 0.8195 | 3 | 9.83 | -- |
| 116.71 | 0.507 | 3.06 | -0.206 | 0.117 | 6.55 | -- | -16.3 | 0.00246 | 7.83 | 0.1002 | 10 | 11.8 | -- |
| 143.87 | 0.559 | 3.02 | -0.097 | 0.108 | 0.912 | -- | -- | -0.0265 | 6.61 | 4.429e-05 | 5 | 7.9 | -- |
| 117.45 | 0.508 | 3.07 | -0.204 | -- | 6.55 | -- | -16.4 | 0.00399 | -- | 0.1002 | 10 | 11.8 | -- |
| 147.53 | 0.569 | 3.02 | -0.107 | 0.13 | -- | -0.546 | -- | -0.0267 | 4.71 | -- | -- | -- | -- |
| 148.11 | 0.57 | 3.02 | -0.103 | 0.142 | -- | -- | -- | -0.0236 | 6.3 | -- | -- | -- | -- |
| 144.34 | 0.56 | 3.02 | -0.149 | -- | 1 | -- | -- | -0.00455 | -- | 0.04538 | 5 | 6.35 | -- |
| 144.13 | 0.559 | 3.02 | -- | 0.118 | 0.959 | -- | -- | 0.00839 | 7.34 | 1.34e-06 | 5 | 6.72 | -- |
| 149.16 | 0.571 | 3.02 | -0.0992 | -- | -- | -- | -- | -0.0206 | -- | -- | -- | -- | -- |
| 148.39 | 0.57 | 3.02 | -- | 0.141 | -- | -- | -- | -0.0122 | 6.34 | -- | -- | -- | -- |
| 144.92 | 0.561 | 3.02 | -- | -- | 0.953 | -- | -- | 0.0113 | -- | 0.05409 | 5 | 6.22 | -- |
| 149.42 | 0.571 | 3.02 | -- | -- | -- | -- | -- | -0.00955 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 108.33 | wind | 7 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 2 | 108.33 | wind | 7 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 11 | 108.90 | wind | 1 | 10 | < th | dose dependent | rect. | 1 | 1 |
| 31 | 114.03 | wind | 1 | 10 | < th | dose independent | rect. | 24 | 2 |
| 106 | 124.21 | wind | 1 | 270 | < th | dose dependent | rect. | 22 | 1 |
| 108 | 125.43 | wind | 1 | 270 | < th | dose independent | rect. | 22 | 1 |
| 111 | 126.87 | wind | 1 | 10 | < th | dose dependent | sin | 17 | NA |
| 128 | 127.98 | wind | 1 | 10 | < th | dose independent | rect. | 6 | 20 |
| 235 | 135.41 | wind | 1 | 270 | < th | dose dependent | rect. | 12 | 14 |
| 269 | 136.08 | radiation | 1 | 90 | < th | dose independent | rect. | 8 | 3 |
| 270 | 136.08 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 1 |
| 271 | 136.08 | radiation | 1 | 90 | < th | dose dependent | rect. | 8 | 3 |
| 290 | 136.43 | atmosphere | 995 | 10 | > th | dose independent | sin | 6 | NA |
| 299 | 136.69 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 300 | 136.69 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 16 | 1 |
| 320 | 136.82 | atmosphere | 995 | 10 | < th | dose independent | sin | 6 | NA |
| 322 | 136.82 | atmosphere | 995 | 10 | < th | dose dependent | sin | 6 | NA |
| 324 | 136.82 | atmosphere | 995 | 90 | < th | dose dependent | rect. | 18 | 22 |
| 328 | 136.84 | atmosphere | 995 | 30 | < th | dose independent | rect. | 18 | 22 |
| 332 | 136.87 | atmosphere | 995 | 90 | < th | dose independent | rect. | 14 | 1 |
| 333 | 136.87 | atmosphere | 995 | 10 | < th | dose independent | rect. | 15 | 1 |
| 594 | 136.99 | temperature | 30 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 637 | 137.44 | wind | 1 | 10 | < th | dose independent | sin | 17 | NA |
| 669 | 137.77 | wind | 1 | 10 | < th | dose dependent | rect. | 24 | 13 |
| 670 | 137.78 | wind | 1 | 10 | < th | dose dependent | rect. | 1 | 11 |
| 859 | 139.02 | temperature | 30 | 10 | > th | dose dependent | sin | 12 | NA |
| 946 | 139.60 | atmosphere | 995 | 10 | < th | dose dependent | no | NA | NA |