FiT-DB / Search/ Help/ Sample detail

Os04g0171800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Cytochrome P450 79A1 (EC 1.14.13.41) (Tyrosine N-monooxygenase) (Cytochrome P450Tyr).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.12 (0.0591) R2 : 0.801
β1 : 2.4 (0.239) R2dD : 0.059 R2D : 0.18
β2 : 2.69 (0.145) R2dC : 0.155 R2C : 0.135
β3 : 6.22 (0.233) R2dE : 0.461 R2E : 0.582
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.297 (0.138) R2dN8 : 0.00365 R2N8 : 0.023
σ : 1.07
deviance : 532.02
__
_____
C
peak time of C : 3.45
E
wheather : temperature
threshold : 13.23
memory length : 5551
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 1.67
open length of G : 3.35

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
521.46 1.07 9.25 1.56 2.62 5.59 -1.15 -3.03 0.0585 3.55 15.16 5546 1.98 3.05
529.34 1.07 9.12 2.42 2.75 6.16 -1.12 -- 0.295 3.46 13.51 5537 1.88 3.18
525.34 1.07 9.26 1.56 2.63 5.54 -- -3.14 0.0417 3.61 15.34 5545 1.98 3.05
532.02 1.07 9.12 2.4 2.69 6.22 -- -- 0.297 3.45 13.23 5551 1.67 3.35
676.19 1.21 9.24 1.81 -- 6.16 -- -2.85 0.354 -- 15.35 6171 1.78 2.25
1356.74 1.73 8.74 5.44 2.45 -- -1.39 -- 1.98 3.92 -- -- -- --
1362.35 1.73 8.73 5.46 2.44 -- -- -- 1.98 3.95 -- -- -- --
637.24 1.18 9.14 1.95 -- 7.85 -- -- 0.274 -- 7.268 7570 1.48 3.16
580.41 1.12 9.23 -- 2.54 6.79 -- -- 0.104 3.69 11.33 9906 0.85 4.23
1689.28 1.92 8.74 5.56 -- -- -- -- 2.05 -- -- -- -- --
2146.79 2.17 8.87 -- 2.55 -- -- -- 1.38 3.92 -- -- -- --
686.9 1.22 9.16 -- -- 8.97 -- -- -0.332 -- 8.528 7646 0.0163 3.54
2503.49 2.34 8.88 -- -- -- -- -- 1.43 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 479.06 radiation 1 43200 < th dose dependent rect. 17 2
2 479.12 radiation 1 43200 < th dose dependent rect. 17 11
5 479.18 radiation 1 43200 < th dose dependent rect. 17 5
6 479.18 radiation 1 43200 < th dose dependent rect. 17 8
12 482.84 radiation 1 43200 < th dose dependent rect. 13 16
13 482.94 radiation 1 43200 < th dose dependent sin 15 NA
33 484.19 radiation 1 43200 < th dose dependent rect. 8 21
82 486.12 radiation 1 43200 < th dose dependent rect. 8 11
84 486.20 radiation 1 43200 < th dose dependent rect. 8 14
118 487.15 radiation 1 43200 < th dose dependent rect. 17 23
199 488.84 radiation 1 43200 < th dose dependent rect. 2 17
210 488.89 radiation 1 43200 < th dose dependent rect. 2 20
215 488.90 radiation 1 43200 < th dose dependent rect. 21 22
246 488.96 radiation 1 43200 < th dose dependent no NA NA
295 495.58 radiation 1 43200 > th dose independent rect. 18 1
330 498.84 radiation 1 43200 < th dose dependent rect. 2 4
341 499.12 radiation 1 43200 < th dose dependent rect. 21 9
396 500.79 radiation 1 43200 > th dose independent rect. 7 12
406 500.82 radiation 1 43200 < th dose independent rect. 7 21
408 500.85 radiation 1 43200 < th dose independent rect. 7 12
412 500.92 radiation 1 43200 < th dose independent rect. 7 15
417 501.08 radiation 1 43200 < th dose independent rect. 17 11
419 501.14 radiation 1 43200 < th dose independent rect. 17 2
423 501.29 radiation 1 43200 < th dose independent rect. 17 5
436 501.76 temperature 20 43200 < th dose dependent rect. 2 1
579 507.85 radiation 1 43200 < th dose independent rect. 18 21
584 508.02 temperature 20 43200 < th dose independent rect. 21 2
595 508.29 radiation 1 43200 > th dose independent rect. 18 21
599 508.66 temperature 20 43200 < th dose independent rect. 19 5
605 508.80 temperature 20 43200 < th dose independent rect. 6 2
614 508.97 temperature 20 43200 > th dose independent rect. 21 2
617 509.08 temperature 20 43200 > th dose independent rect. 6 2
623 509.40 radiation 1 43200 < th dose independent sin 19 NA
666 510.22 temperature 20 43200 > th dose independent rect. 18 6
683 510.68 radiation 1 43200 > th dose independent sin 20 NA
728 511.41 temperature 20 43200 < th dose dependent sin 9 NA
729 511.43 temperature 20 43200 < th dose independent rect. 17 15
731 511.49 temperature 20 43200 < th dose independent sin 13 NA
738 511.56 humidity 90 43200 > th dose dependent rect. 3 21
751 511.76 temperature 20 43200 < th dose independent rect. 14 18
788 512.31 radiation 1 43200 < th dose independent rect. 13 15
791 512.33 radiation 1 43200 > th dose independent rect. 18 17
794 512.35 radiation 1 43200 < th dose independent rect. 13 6
807 512.44 radiation 1 43200 < th dose independent rect. 13 9
846 512.81 temperature 20 43200 > th dose independent rect. 18 16
859 512.94 temperature 20 43200 > th dose independent sin 13 NA
909 513.26 temperature 20 43200 > th dose independent rect. 14 18
982 513.69 radiation 1 43200 > th dose independent rect. 7 8