Os04g0168000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0168000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 125.33 | 0.526 | 3.53 | 0.161 | 0.276 | 0.972 | -0.296 | 1.13 | -0.0261 | 6.42 | 0.4915 | 1449 | -- | -- |
| 125.87 | 0.523 | 3.52 | 0.249 | 0.277 | 0.707 | -0.291 | -- | -0.0142 | 6.1 | 0.4819 | 1441 | -- | -- |
| 125.54 | 0.522 | 3.53 | 0.153 | 0.275 | 0.987 | -- | 1.18 | -0.0266 | 6.55 | 0.4801 | 1449 | -- | -- |
| 126.06 | 0.523 | 3.52 | 0.264 | 0.27 | 0.704 | -- | -- | -0.0161 | 6.61 | 0.4774 | 1449 | -- | -- |
| 129.36 | 0.53 | 3.53 | 0.161 | -- | 0.961 | -- | 1.14 | -0.021 | -- | 0.48 | 1432 | -- | -- |
| 131.12 | 0.537 | 3.53 | 0.0863 | 0.265 | -- | -0.349 | -- | -0.0991 | 6.11 | -- | -- | -- | -- |
| 131.41 | 0.537 | 3.53 | 0.0833 | 0.264 | -- | -- | -- | -0.0976 | 6.31 | -- | -- | -- | -- |
| 126.54 | 0.524 | 3.53 | 0.183 | -- | 0.694 | -- | -- | -0.0499 | -- | 0.6602 | 2278 | -- | -- |
| 127.61 | 0.526 | 3.52 | -- | 0.272 | 0.562 | -- | -- | -0.0489 | 6.52 | 0.5177 | 1454 | -- | -- |
| 135.02 | 0.543 | 3.53 | 0.0903 | -- | -- | -- | -- | -0.092 | -- | -- | -- | -- | -- |
| 131.59 | 0.537 | 3.53 | -- | 0.265 | -- | -- | -- | -0.107 | 6.29 | -- | -- | -- | -- |
| 127.4 | 0.526 | 3.53 | -- | -- | 0.657 | -- | -- | -0.0642 | -- | 0.68 | 2278 | -- | -- |
| 135.23 | 0.543 | 3.54 | -- | -- | -- | -- | -- | -0.102 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 119.52 | radiation | 1.0 | 90 | < th | dose independent | rect. | 6 | 11 |
| 2 | 119.84 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 7 | 3 |
| 3 | 119.88 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 6 | 11 |
| 4 | 119.98 | humidity | 80.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 11 | 120.41 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 19 | 120.52 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 8 | 1 |
| 22 | 120.53 | radiation | 1.0 | 10 | < th | dose independent | rect. | 6 | 6 |
| 24 | 120.53 | humidity | 80.0 | 10 | < th | dose independent | rect. | 24 | 8 |
| 28 | 120.59 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 7 | 1 |
| 34 | 120.59 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 7 | 1 |
| 40 | 120.59 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 6 | 8 |
| 44 | 120.64 | wind | 3.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 47 | 120.66 | radiation | 1.0 | 10 | < th | dose independent | rect. | 6 | 2 |
| 57 | 120.69 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 7 | 7 |
| 67 | 120.69 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 7 | 7 |
| 82 | 120.73 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 5 | 3 |
| 100 | 120.73 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 122 | 120.78 | radiation | 10.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 126 | 120.83 | wind | 3.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 133 | 120.84 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 8 | 3 |
| 175 | 120.99 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 7 | 1 |
| 213 | 120.99 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 258 | 121.07 | temperature | 25.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 276 | 121.24 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 23 | 16 |
| 278 | 121.24 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 23 | 16 |
| 295 | 121.46 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 3 | 8 |
| 296 | 121.46 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 3 | 8 |
| 299 | 121.48 | wind | 3.0 | 43200 | > th | dose independent | rect. | 8 | 6 |
| 300 | 121.49 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 6 |
| 301 | 121.49 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 8 | 7 |
| 302 | 121.50 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 8 | 7 |
| 304 | 121.52 | humidity | 90.0 | 90 | < th | dose independent | rect. | 1 | 7 |
| 306 | 121.53 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 317 | 121.59 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 319 | 121.60 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 353 | 121.90 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 9 | 3 |
| 367 | 121.97 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 7 | 14 |
| 368 | 121.98 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 383 | 122.00 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 2 | 5 |
| 384 | 122.00 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 23 | 8 |
| 385 | 122.00 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 21 | 10 |
| 399 | 122.02 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 401 | 122.02 | wind | 3.0 | 43200 | > th | dose dependent | sin | 23 | NA |
| 446 | 122.13 | wind | 5.0 | 43200 | > th | dose independent | rect. | 7 | 13 |
| 447 | 122.13 | wind | 5.0 | 43200 | < th | dose independent | rect. | 7 | 13 |
| 495 | 122.19 | wind | 5.0 | 43200 | < th | dose independent | sin | 23 | NA |
| 500 | 122.19 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 516 | 122.21 | temperature | 15.0 | 720 | > th | dose independent | rect. | 8 | 7 |
| 521 | 122.22 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 2 | 6 |
| 530 | 122.23 | wind | 5.0 | 43200 | > th | dose independent | sin | 22 | NA |
| 548 | 122.24 | wind | 9.0 | 43200 | < th | dose dependent | sin | 0 | NA |
| 549 | 122.24 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 586 | 122.26 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 609 | 122.28 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 8 | 14 |
| 633 | 122.31 | wind | 3.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 719 | 122.39 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 7 | 1 |
| 729 | 122.40 | wind | 5.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 903 | 122.50 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 23 |