Os04g0161800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os04g0161800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 162.19 | 0.598 | 2.92 | 0.137 | 0.19 | 1.02 | -0.244 | -3.51 | 0.0593 | 5.36 | 56.96 | 14 | -- | -- |
| 167.34 | 0.607 | 2.92 | 0.119 | 0.155 | 0.44 | 0.621 | -- | 0.0515 | 2.02 | 67.03 | 3 | -- | -- |
| 162.21 | 0.593 | 2.93 | 0.13 | 0.192 | 1.23 | -- | -3.99 | 0.0574 | 4.76 | 55.72 | 13 | -- | -- |
| 167.92 | 0.604 | 2.92 | 0.0943 | 0.252 | 0.373 | -- | -- | 0.0381 | 4.06 | 75 | 8 | -- | -- |
| 164.08 | 0.597 | 2.93 | 0.14 | -- | 1.17 | -- | -4.06 | 0.0606 | -- | 55.43 | 13 | -- | -- |
| 168.37 | 0.608 | 2.92 | 0.141 | 0.0748 | -- | -0.797 | -- | 0.0247 | 9.16 | -- | -- | -- | -- |
| 169.76 | 0.61 | 2.92 | 0.107 | 0.151 | -- | -- | -- | 0.0207 | 5.57 | -- | -- | -- | -- |
| 170 | 0.61 | 2.92 | 0.106 | -- | 0.308 | -- | -- | 0.042 | -- | 64 | 14 | -- | -- |
| 168.15 | 0.604 | 2.92 | -- | 0.256 | 0.378 | -- | -- | 0.028 | 4.04 | 75 | 10 | -- | -- |
| 170.95 | 0.611 | 2.92 | 0.112 | -- | -- | -- | -- | 0.0244 | -- | -- | -- | -- | -- |
| 170.07 | 0.61 | 2.93 | -- | 0.153 | -- | -- | -- | 0.00877 | 5.54 | -- | -- | -- | -- |
| 170.29 | 0.608 | 2.92 | -- | -- | 0.306 | -- | -- | 0.0302 | -- | 63.07 | 8 | -- | -- |
| 171.29 | 0.611 | 2.93 | -- | -- | -- | -- | -- | 0.0119 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 151.62 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 5 | 1 |
| 3 | 151.79 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 19 | 1 |
| 13 | 151.79 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 19 | 1 |
| 71 | 154.54 | wind | 7.0 | 30 | > th | dose dependent | rect. | 19 | 1 |
| 73 | 155.51 | temperature | 25.0 | 10 | > th | dose independent | rect. | 5 | 1 |
| 98 | 156.35 | wind | 7.0 | 90 | > th | dose independent | rect. | 24 | 9 |
| 100 | 156.52 | wind | 7.0 | 90 | > th | dose dependent | rect. | 24 | 9 |
| 127 | 156.85 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 20 | 11 |
| 130 | 157.13 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 5 | 1 |
| 143 | 157.17 | wind | 3.0 | 10 | > th | dose dependent | rect. | 1 | 5 |
| 146 | 157.28 | wind | 7.0 | 90 | > th | dose independent | rect. | 24 | 5 |
| 161 | 157.30 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 22 | 1 |
| 163 | 157.30 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 22 | 1 |
| 164 | 157.30 | wind | 7.0 | 90 | > th | dose dependent | rect. | 24 | 4 |
| 175 | 157.33 | wind | 5.0 | 90 | > th | dose independent | rect. | 1 | 1 |
| 178 | 157.33 | wind | 5.0 | 90 | > th | dose dependent | rect. | 1 | 1 |
| 204 | 157.83 | wind | 3.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 212 | 157.95 | wind | 3.0 | 10 | > th | dose dependent | rect. | 1 | 1 |
| 230 | 158.11 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 241 | 158.41 | radiation | 1.0 | 720 | > th | dose independent | rect. | 10 | 8 |
| 242 | 158.48 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 20 | 8 |
| 253 | 158.53 | wind | 7.0 | 30 | > th | dose independent | rect. | 19 | 1 |
| 258 | 158.58 | wind | 9.0 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 290 | 158.58 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 327 | 158.66 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 20 | 12 |
| 329 | 158.68 | wind | 1.0 | 720 | < th | dose dependent | rect. | 17 | 1 |
| 331 | 158.69 | wind | 1.0 | 270 | < th | dose independent | rect. | 19 | 1 |
| 333 | 158.69 | wind | 1.0 | 270 | < th | dose dependent | rect. | 19 | 1 |
| 353 | 158.88 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 20 | 11 |
| 354 | 158.89 | wind | 1.0 | 720 | < th | dose dependent | rect. | 17 | 3 |
| 362 | 159.01 | humidity | 60.0 | 720 | > th | dose independent | rect. | 3 | 8 |
| 365 | 159.03 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 19 | 14 |
| 369 | 159.08 | wind | 1.0 | 720 | < th | dose dependent | rect. | 16 | 5 |
| 371 | 159.12 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 378 | 159.20 | humidity | 60.0 | 720 | < th | dose independent | rect. | 8 | 3 |
| 422 | 159.51 | humidity | 50.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 434 | 159.69 | radiation | 1.0 | 720 | > th | dose independent | rect. | 10 | 19 |
| 470 | 159.85 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 6 | 3 |
| 488 | 159.97 | precipitation | 0.1 | 10 | < th | dose independent | sin | 22 | NA |
| 489 | 159.97 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 22 | NA |
| 502 | 160.13 | radiation | 1.0 | 720 | < th | dose independent | rect. | 17 | 8 |
| 505 | 160.19 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 24 | 7 |
| 508 | 160.24 | radiation | 1.0 | 720 | < th | dose independent | rect. | 15 | 10 |
| 509 | 160.25 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 519 | 160.28 | wind | 3.0 | 10 | > th | dose independent | rect. | 1 | 5 |
| 528 | 160.33 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 5 | 2 |
| 543 | 160.35 | humidity | 90.0 | 720 | < th | dose independent | rect. | 10 | 8 |
| 544 | 160.35 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 3 | 5 |
| 549 | 160.40 | wind | 9.0 | 43200 | > th | dose independent | rect. | 3 | 6 |
| 568 | 160.46 | wind | 3.0 | 720 | < th | dose dependent | rect. | 14 | 1 |
| 580 | 160.50 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 19 | 14 |
| 586 | 160.53 | humidity | 60.0 | 270 | < th | dose independent | sin | 9 | NA |
| 589 | 160.57 | radiation | 1.0 | 720 | < th | dose independent | rect. | 9 | 16 |
| 593 | 160.58 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 604 | 160.58 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 621 | 160.65 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 4 | 4 |
| 623 | 160.66 | radiation | 1.0 | 720 | > th | dose independent | rect. | 17 | 1 |
| 627 | 160.68 | humidity | 60.0 | 720 | < th | dose dependent | rect. | 8 | 3 |
| 686 | 160.79 | radiation | 1.0 | 720 | < th | dose independent | rect. | 15 | 3 |
| 700 | 160.85 | humidity | 50.0 | 10 | > th | dose independent | sin | 9 | NA |
| 707 | 160.87 | radiation | 1.0 | 720 | < th | dose independent | rect. | 8 | 10 |
| 708 | 160.88 | humidity | 60.0 | 270 | > th | dose independent | sin | 9 | NA |
| 714 | 160.92 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 18 | 16 |
| 720 | 160.94 | humidity | 60.0 | 90 | > th | dose independent | rect. | 3 | 12 |
| 721 | 160.95 | wind | 1.0 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 723 | 160.96 | wind | 9.0 | 43200 | < th | dose independent | rect. | 4 | 5 |
| 740 | 161.01 | precipitation | 0.1 | 10 | > th | dose independent | sin | 22 | NA |
| 775 | 161.11 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 18 | 16 |
| 776 | 161.11 | humidity | 60.0 | 30 | < th | dose dependent | sin | 8 | NA |
| 780 | 161.13 | wind | 5.0 | 10 | > th | dose independent | rect. | 16 | 4 |
| 781 | 161.13 | humidity | 90.0 | 270 | < th | dose independent | rect. | 10 | 14 |
| 787 | 161.17 | radiation | 1.0 | 720 | > th | dose independent | sin | 19 | NA |
| 788 | 161.17 | humidity | 80.0 | 720 | > th | dose independent | rect. | 15 | 4 |
| 803 | 161.19 | wind | 9.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 817 | 161.21 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 22 | NA |
| 840 | 161.23 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 853 | 161.26 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 22 | 2 |
| 856 | 161.26 | humidity | 70.0 | 270 | < th | dose dependent | sin | 8 | NA |
| 868 | 161.29 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 895 | 161.34 | humidity | 90.0 | 720 | < th | dose independent | rect. | 10 | 10 |
| 915 | 161.37 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 2 | 1 |
| 932 | 161.40 | humidity | 50.0 | 10 | > th | dose independent | sin | 3 | NA |
| 938 | 161.41 | radiation | 1.0 | 720 | < th | dose independent | sin | 18 | NA |
| 950 | 161.45 | wind | 9.0 | 43200 | < th | dose independent | rect. | 24 | 9 |
| 957 | 161.47 | humidity | 80.0 | 720 | > th | dose dependent | rect. | 14 | 6 |
| 985 | 161.55 | wind | 9.0 | 4320 | < th | dose independent | rect. | 3 | 1 |
| 992 | 161.57 | humidity | 90.0 | 270 | < th | dose independent | sin | 18 | NA |