Os04g0156200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Prefoldin domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0156200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Prefoldin domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 277.68 | 0.783 | 4.22 | -2.46 | 0.319 | -0.716 | -1.06 | -3.51 | 0.671 | 16.4 | 40.47 | 3150 | -- | -- |
| 290.78 | 0.794 | 4.19 | -2.22 | 0.342 | -0.78 | -1.07 | -- | 0.715 | 16.6 | 30.09 | 3260 | -- | -- |
| 280.56 | 0.78 | 4.22 | -2.47 | 0.31 | -0.718 | -- | -3.76 | 0.667 | 15.9 | 41.82 | 3151 | -- | -- |
| 294.22 | 0.799 | 4.21 | -2.14 | 0.319 | -0.621 | -- | -- | 0.763 | 16.4 | 20 | 2707 | -- | -- |
| 285.72 | 0.787 | 4.22 | -2.49 | -- | -0.716 | -- | -3.99 | 0.653 | -- | 41.85 | 3150 | -- | -- |
| 304.35 | 0.818 | 4.23 | -2.17 | 0.364 | -- | -1.07 | -- | 0.665 | 15.9 | -- | -- | -- | -- |
| 307.57 | 0.821 | 4.23 | -2.18 | 0.357 | -- | -- | -- | 0.659 | 15.4 | -- | -- | -- | -- |
| 299.6 | 0.806 | 4.21 | -2.16 | -- | -0.662 | -- | -- | 0.753 | -- | 20 | 2709 | -- | -- |
| 414.56 | 0.948 | 4.15 | -- | 0.365 | -0.74 | -- | -- | 1.03 | 16.5 | 20 | 2680 | -- | -- |
| 314.72 | 0.829 | 4.23 | -2.19 | -- | -- | -- | -- | 0.65 | -- | -- | -- | -- | -- |
| 432.8 | 0.973 | 4.17 | -- | 0.4 | -- | -- | -- | 0.902 | 15.4 | -- | -- | -- | -- |
| 413.59 | 0.947 | 4.14 | -- | -- | -0.81 | -- | -- | 1.03 | -- | 20 | 1256 | -- | -- |
| 441.79 | 0.981 | 4.17 | -- | -- | -- | -- | -- | 0.893 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 271.85 | radiation | 40.0 | 4320 | > th | dose independent | rect. | 7 | 3 |
| 18 | 272.01 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 7 |
| 19 | 272.97 | wind | 9.0 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 20 | 273.07 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 23 | 273.42 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 8 |
| 24 | 273.56 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 8 |
| 25 | 273.56 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 8 |
| 26 | 273.57 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 8 |
| 27 | 273.58 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 10 |
| 28 | 273.62 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 29 | 273.62 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 4 |
| 30 | 273.67 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 31 | 273.67 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 7 | 2 |
| 60 | 273.94 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 14 |
| 62 | 273.95 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 4 |
| 64 | 273.96 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 65 | 273.96 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 12 |
| 67 | 274.01 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 10 |
| 79 | 274.10 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 81 | 274.11 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 2 |
| 85 | 274.20 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 24 | 6 |
| 87 | 274.26 | radiation | 40.0 | 4320 | > th | dose independent | sin | 11 | NA |
| 92 | 274.32 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 16 | 16 |
| 114 | 274.61 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 14 |
| 115 | 274.61 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 14 |
| 116 | 274.63 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 24 | 6 |
| 121 | 274.66 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 14 |
| 122 | 274.68 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 10 | 2 |
| 123 | 274.69 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 24 | 6 |
| 124 | 274.69 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 24 | 6 |
| 128 | 274.72 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 4 | NA |
| 165 | 275.05 | precipitation | 0.1 | 43200 | > th | dose independent | sin | 4 | NA |
| 169 | 275.06 | precipitation | 0.1 | 43200 | < th | dose independent | sin | 4 | NA |
| 170 | 275.06 | wind | 9.0 | 43200 | < th | dose independent | rect. | 5 | 8 |
| 173 | 275.06 | precipitation | 0.1 | 43200 | < th | dose dependent | sin | 4 | NA |
| 194 | 275.18 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 24 | 12 |
| 202 | 275.22 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 206 | 275.24 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 24 | 12 |
| 209 | 275.24 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 24 | 12 |
| 220 | 275.27 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 17 |
| 224 | 275.27 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 17 |
| 229 | 275.31 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 17 |
| 236 | 275.35 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 238 | 275.35 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 245 | 275.39 | wind | 9.0 | 43200 | < th | dose independent | rect. | 24 | 13 |
| 262 | 275.45 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 1 | 4 |
| 271 | 275.50 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 15 |
| 279 | 275.54 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 4 | 9 |
| 303 | 275.63 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 18 |
| 326 | 275.71 | radiation | 40.0 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 350 | 275.84 | wind | 3.0 | 1440 | > th | dose dependent | rect. | 6 | 4 |
| 351 | 275.85 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 1 | 4 |
| 372 | 275.90 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 15 |
| 374 | 275.90 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 15 |
| 382 | 275.94 | wind | 1.0 | 270 | < th | dose dependent | rect. | 22 | 1 |
| 383 | 275.95 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 15 |
| 392 | 276.01 | radiation | 30.0 | 4320 | > th | dose dependent | rect. | 7 | 4 |
| 468 | 276.14 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 21 | 13 |
| 470 | 276.14 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 21 | 13 |
| 503 | 276.23 | wind | 9.0 | 43200 | > th | dose independent | rect. | 4 | 9 |
| 521 | 276.29 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 17 |
| 558 | 276.46 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 2 | 9 |
| 563 | 276.49 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 4 | 7 |
| 576 | 276.50 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 18 | 17 |
| 577 | 276.51 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 7 | 4 |
| 587 | 276.53 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 20 | 15 |
| 612 | 276.60 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 19 |
| 643 | 276.76 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 21 |
| 649 | 276.77 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 21 |
| 651 | 276.77 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 21 |
| 684 | 276.85 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 21 |
| 695 | 276.91 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 18 | 11 |
| 732 | 277.03 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 796 | 277.24 | radiation | 30.0 | 4320 | > th | dose dependent | sin | 11 | NA |
| 801 | 277.30 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 22 | 11 |
| 809 | 277.33 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 19 |
| 817 | 277.38 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 19 |
| 819 | 277.38 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 19 |
| 821 | 277.39 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 6 | 4 |
| 830 | 277.43 | wind | 9.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 876 | 277.54 | wind | 5.0 | 1440 | < th | dose independent | rect. | 6 | 3 |
| 884 | 277.57 | wind | 7.0 | 4320 | > th | dose dependent | sin | 6 | NA |
| 892 | 277.60 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 22 | 16 |
| 894 | 277.62 | wind | 7.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 896 | 277.62 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 1 | 6 |
| 914 | 277.68 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 23 | 8 |
| 918 | 277.69 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 937 | 277.72 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 20 | 11 |