Os04g0125700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Concanavalin A-like lectin/glucanase domain containing protein.
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Os04g0125700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Concanavalin A-like lectin/glucanase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 99.69 | 0.469 | 3.35 | 1 | 0.599 | 1.27 | 2.48 | 1.95 | -0.077 | 9.37 | 24.4 | 599 | -- | -- |
| 104.18 | 0.475 | 3.31 | 1.32 | 0.611 | 1.05 | 2.83 | -- | -0.0118 | 9.37 | 24.86 | 568 | -- | -- |
| 119.59 | 0.509 | 3.38 | 0.88 | 0.628 | 1.43 | -- | 3.26 | -0.114 | 9.42 | 24.2 | 597 | -- | -- |
| 134.03 | 0.539 | 3.31 | 1.4 | 0.523 | 1.02 | -- | -- | 0.000475 | 9.74 | 27.64 | 564 | -- | -- |
| 132.11 | 0.535 | 3.39 | 0.825 | -- | 1.49 | -- | 3.39 | -0.0932 | -- | 28.09 | 709 | -- | -- |
| 120.71 | 0.515 | 3.36 | 1.02 | 0.741 | -- | 2.85 | -- | -0.224 | 9.26 | -- | -- | -- | -- |
| 149.79 | 0.573 | 3.35 | 1.12 | 0.732 | -- | -- | -- | -0.222 | 9.18 | -- | -- | -- | -- |
| 145.91 | 0.563 | 3.31 | 1.51 | -- | 1.44 | -- | -- | 0.0525 | -- | 30.34 | 714 | -- | -- |
| 179.54 | 0.624 | 3.37 | -- | 0.685 | 0.534 | -- | -- | -0.284 | 9.84 | 41.41 | 265 | -- | -- |
| 180.85 | 0.628 | 3.37 | 1.12 | -- | -- | -- | -- | -0.218 | -- | -- | -- | -- | -- |
| 182.87 | 0.633 | 3.38 | -- | 0.733 | -- | -- | -- | -0.347 | 9.07 | -- | -- | -- | -- |
| 199.38 | 0.658 | 3.37 | -- | -- | 0.907 | -- | -- | -0.219 | -- | 32.28 | 667 | -- | -- |
| 213.81 | 0.683 | 3.4 | -- | -- | -- | -- | -- | -0.342 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 87.60 | temperature | 25 | 270 | < th | dose dependent | rect. | 2 | 10 |
| 9 | 88.82 | temperature | 25 | 270 | < th | dose dependent | sin | 4 | NA |
| 12 | 89.05 | temperature | 20 | 270 | > th | dose dependent | sin | 6 | NA |
| 14 | 89.17 | temperature | 10 | 270 | > th | dose dependent | sin | 5 | NA |
| 32 | 90.58 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 8 |
| 60 | 91.97 | temperature | 20 | 270 | > th | dose dependent | rect. | 24 | 11 |
| 65 | 92.34 | temperature | 20 | 270 | > th | dose dependent | rect. | 24 | 14 |
| 164 | 95.75 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 180 | 96.05 | temperature | 25 | 270 | < th | dose independent | rect. | 5 | 7 |
| 208 | 96.61 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 1 |
| 227 | 97.04 | temperature | 30 | 720 | < th | dose dependent | sin | 9 | NA |
| 273 | 97.46 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 5 |
| 357 | 98.23 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 6 |
| 506 | 99.02 | radiation | 1 | 4320 | < th | dose dependent | rect. | 19 | 11 |
| 508 | 99.03 | radiation | 1 | 4320 | < th | dose dependent | rect. | 4 | 2 |
| 592 | 99.36 | temperature | 25 | 270 | < th | dose dependent | rect. | 7 | 2 |
| 625 | 99.55 | radiation | 40 | 43200 | < th | dose dependent | rect. | 18 | 6 |
| 643 | 99.62 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 13 |
| 648 | 99.64 | radiation | 40 | 43200 | < th | dose dependent | rect. | 18 | 8 |
| 650 | 99.64 | radiation | 1 | 4320 | < th | dose dependent | rect. | 17 | 14 |
| 679 | 99.77 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 13 |
| 693 | 99.80 | radiation | 40 | 43200 | < th | dose dependent | rect. | 18 | 10 |
| 726 | 99.90 | radiation | 1 | 4320 | < th | dose dependent | sin | 10 | NA |
| 742 | 99.94 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 755 | 99.99 | humidity | 90 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 837 | 100.25 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 857 | 100.28 | humidity | 90 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 867 | 100.30 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 868 | 100.30 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 1 |
| 887 | 100.35 | humidity | 90 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 905 | 100.38 | humidity | 90 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 924 | 100.42 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 2 |
| 937 | 100.44 | humidity | 90 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 949 | 100.46 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 958 | 100.47 | humidity | 70 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 959 | 100.47 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 975 | 100.48 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 1000 | 100.50 | radiation | 40 | 4320 | < th | dose dependent | rect. | 5 | 2 |