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Os04g0121300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Subtilase.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 5.78 (0.0433) R2 : 0.637
β1 : 0.961 (0.161) R2dD : 0.031 R2D : -0.135
β2 : 1.91 (0.105) R2dC : 0.273 R2C : 0.0804
β3 : 2.8 (0.187) R2dE : 0.202 R2E : -0.13
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.99 (0.0944) R2dN8 : 0.498 R2N8 : 0.249
σ : 0.805
deviance : 298.76
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C
peak time of C : 1.28
E
wheather : temperature
threshold : 31.09
memory length : 265
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 0.0603
open length of G : 20

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
297.08 0.81 5.79 0.839 1.85 2.85 0.104 1.19 1.98 1.27 30.57 267 0.0666 20.1
298.59 0.805 5.78 0.957 1.9 2.81 -0.217 -- 1.98 1.3 31.13 262 0.0668 20.1
297.07 0.803 5.79 0.837 1.85 2.84 -- 1.14 1.97 1.27 30.77 263 0.0472 20.2
298.76 0.805 5.78 0.961 1.91 2.8 -- -- 1.99 1.28 31.09 265 0.0603 20
387.1 0.916 5.81 0.707 -- 3.19 -- 2.97 1.99 -- 29.14 98 0.0128 23.2
398.13 0.935 5.83 0.464 1.89 -- 0.402 -- 1.65 3.28 -- -- -- --
398.65 0.935 5.83 0.456 1.89 -- -- -- 1.64 3.29 -- -- -- --
385.82 0.915 5.76 1.21 -- 3.84 -- -- 2.06 -- 39.08 19 0.15 23.8
322.47 0.836 5.82 -- 1.86 2.51 -- -- 1.93 1.36 30.91 250 0.183 19.9
601.1 1.15 5.83 0.536 -- -- -- -- 1.69 -- -- -- -- --
404.13 0.94 5.84 -- 1.9 -- -- -- 1.59 3.29 -- -- -- --
426.19 0.962 5.76 -- -- 3.82 -- -- 2.06 -- 38.87 19 0.113 23.8
608.68 1.15 5.84 -- -- -- -- -- 1.64 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 297.60 temperature 30 270 < th dose dependent rect. 24 20
6 301.16 temperature 30 30 < th dose dependent rect. 24 23
11 305.36 temperature 25 270 < th dose independent rect. 1 18
13 305.93 temperature 30 10 < th dose dependent rect. 2 21
17 307.16 temperature 30 90 < th dose dependent rect. 3 19
30 309.82 temperature 30 10 < th dose dependent rect. 4 19
88 321.88 temperature 20 10 > th dose dependent sin 0 NA
91 322.00 temperature 20 90 > th dose dependent sin 1 NA
101 322.72 temperature 25 270 > th dose independent sin 3 NA
112 323.92 temperature 20 270 > th dose dependent sin 4 NA
116 324.28 temperature 10 30 > th dose dependent rect. 21 23
129 325.14 temperature 25 270 < th dose independent sin 3 NA
130 325.18 temperature 25 270 > th dose independent rect. 2 13
139 325.66 temperature 20 10 > th dose dependent rect. 21 23
143 325.77 temperature 20 270 > th dose dependent rect. 4 10
151 325.99 temperature 30 10 < th dose dependent rect. 9 14
154 326.24 temperature 25 270 > th dose independent rect. 6 9
157 326.38 temperature 30 10 < th dose dependent sin 23 NA
188 327.43 temperature 20 10 > th dose dependent rect. 23 21
197 327.78 temperature 30 10 < th dose dependent rect. 7 16
198 327.80 temperature 10 270 > th dose dependent rect. 8 16
205 328.17 temperature 10 10 > th dose dependent sin 0 NA
209 328.33 temperature 10 270 > th dose dependent rect. 18 22
210 328.34 temperature 20 270 > th dose dependent rect. 18 21
213 328.49 temperature 20 10 > th dose dependent rect. 23 18
227 329.33 temperature 20 10 > th dose dependent rect. 6 22
259 330.34 temperature 20 270 > th dose dependent rect. 21 17
317 331.61 temperature 20 10 > th dose dependent rect. 8 12
337 332.06 temperature 20 10 > th dose dependent rect. 6 20
369 332.58 temperature 20 10 > th dose dependent rect. 8 16
370 332.58 temperature 20 10 > th dose dependent rect. 8 20
381 332.74 temperature 20 10 > th dose dependent rect. 8 18
420 333.20 temperature 10 270 > th dose dependent rect. 4 22
429 333.38 temperature 30 270 < th dose dependent rect. 24 11
433 333.44 temperature 25 10 > th dose dependent rect. 21 20
438 333.57 temperature 20 10 > th dose dependent rect. 6 14
451 333.86 temperature 20 10 > th dose dependent rect. 6 18
474 334.21 temperature 20 10 > th dose dependent rect. 6 11
485 334.33 atmosphere 1000 10 > th dose dependent rect. 15 8
524 334.96 radiation 1 43200 < th dose dependent rect. 24 1
538 335.10 temperature 25 10 > th dose dependent rect. 1 16
602 335.84 temperature 20 30 > th dose dependent rect. 1 23
630 336.20 radiation 10 43200 < th dose dependent rect. 24 3
697 337.11 temperature 25 10 > th dose dependent rect. 19 22
744 337.78 temperature 25 10 > th dose dependent rect. 1 19
806 338.39 temperature 20 720 > th dose dependent rect. 3 6
855 338.85 temperature 20 10 > th dose dependent rect. 10 16
859 338.89 temperature 20 10 > th dose dependent rect. 3 23
862 338.94 temperature 20 10 > th dose dependent rect. 10 14
869 338.99 temperature 20 10 > th dose dependent no NA NA
938 339.60 temperature 20 10 > th dose dependent rect. 10 18
946 339.66 temperature 30 10 < th dose dependent rect. 14 9
980 339.88 temperature 25 10 > th dose dependent rect. 10 23