Os04g0121100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase S8 and S53, subtilisin, kexin, sedolisin domain containing protein.
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Os04g0121100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase S8 and S53, subtilisin, kexin, sedolisin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 472.09 | 1.02 | 8.22 | -4.73 | 3.74 | 3.3 | 5 | -6.02 | -0.213 | 7.54 | 26.3 | 839 | 9.43 | -- |
| 492.2 | 1.03 | 8.15 | -3.8 | 3.52 | 2.92 | 5.74 | -- | -0.128 | 7.48 | 26.3 | 877 | 9.11 | -- |
| 532.96 | 1.08 | 8.26 | -5.13 | 3.78 | 3.89 | -- | -10.2 | -0.25 | 7.55 | 26.4 | 825 | 8.41 | -- |
| 570.24 | 1.11 | 8.09 | -3.55 | 3.6 | 3.45 | -- | -- | 0.165 | 7.45 | 26.4 | 765 | 7.46 | -- |
| 1076.34 | 1.53 | 8.41 | -5.24 | -- | 4.61 | -- | -8.89 | -0.413 | -- | 26.3 | 1067 | 7.24 | -- |
| 649.3 | 1.19 | 8 | -3.09 | 3.67 | -- | 5.84 | -- | 0.571 | 6.55 | -- | -- | -- | -- |
| 733.26 | 1.27 | 8.01 | -3.01 | 3.7 | -- | -- | -- | 0.55 | 6.39 | -- | -- | -- | -- |
| 729.57 | 1.26 | 8.09 | -3.17 | -- | 3.94 | -- | -- | 0.518 | -- | 14.6 | 914 | 7.32 | -- |
| 893.89 | 1.39 | 8.07 | -- | 3.91 | 2.86 | -- | -- | 0.393 | 7.38 | 26.3 | 606 | 7.23 | -- |
| 1445.35 | 1.78 | 8.08 | -2.91 | -- | -- | -- | -- | 0.629 | -- | -- | -- | -- | -- |
| 971.84 | 1.46 | 7.94 | -- | 3.66 | -- | -- | -- | 0.885 | 6.43 | -- | -- | -- | -- |
| 971.84 | 1.45 | 8.02 | -- | -- | 3.65 | -- | -- | 0.885 | -- | 13.42 | 948 | 7.47 | -- |
| 1669.12 | 1.91 | 8.01 | -- | -- | -- | -- | -- | 0.952 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 476.72 | temperature | 25 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 2 | 482.26 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 5 |
| 7 | 488.96 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 10 |
| 20 | 497.96 | temperature | 25 | 720 | > th | dose independent | rect. | 18 | 4 |
| 59 | 509.49 | temperature | 25 | 720 | > th | dose independent | rect. | 20 | 1 |
| 106 | 519.08 | temperature | 25 | 720 | < th | dose independent | rect. | 17 | 7 |
| 127 | 522.89 | temperature | 25 | 720 | > th | dose dependent | sin | 13 | NA |
| 142 | 525.37 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 5 |
| 161 | 528.32 | temperature | 25 | 720 | > th | dose independent | sin | 16 | NA |
| 166 | 528.52 | temperature | 25 | 720 | > th | dose independent | rect. | 11 | 13 |
| 242 | 535.52 | radiation | 1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 248 | 536.11 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 250 | 536.43 | humidity | 60 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 251 | 536.48 | humidity | 70 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 253 | 536.64 | radiation | 1 | 43200 | > th | dose independent | rect. | 16 | 18 |
| 255 | 536.70 | radiation | 1 | 43200 | > th | dose independent | rect. | 16 | 16 |
| 264 | 536.85 | radiation | 1 | 43200 | < th | dose independent | rect. | 16 | 16 |
| 265 | 536.90 | radiation | 1 | 43200 | > th | dose independent | sin | 11 | NA |
| 268 | 536.91 | radiation | 1 | 43200 | < th | dose independent | rect. | 16 | 18 |
| 274 | 536.98 | humidity | 60 | 43200 | < th | dose independent | rect. | 13 | 4 |
| 276 | 537.00 | radiation | 1 | 43200 | < th | dose independent | sin | 11 | NA |
| 305 | 537.31 | radiation | 1 | 43200 | < th | dose independent | rect. | 24 | 10 |
| 307 | 537.33 | radiation | 1 | 43200 | > th | dose independent | rect. | 4 | 6 |
| 310 | 537.33 | radiation | 1 | 43200 | < th | dose independent | rect. | 2 | 8 |
| 322 | 537.34 | radiation | 1 | 43200 | < th | dose independent | rect. | 4 | 6 |
| 348 | 537.52 | wind | 7 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 378 | 537.63 | wind | 7 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 415 | 537.72 | humidity | 60 | 43200 | > th | dose independent | rect. | 13 | 5 |
| 427 | 537.76 | humidity | 80 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 489 | 538.02 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 490 | 538.02 | humidity | 80 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 548 | 538.27 | radiation | 1 | 43200 | > th | dose independent | rect. | 4 | 14 |
| 561 | 538.30 | radiation | 1 | 43200 | > th | dose independent | no | NA | NA |
| 562 | 538.30 | humidity | 60 | 43200 | > th | dose independent | rect. | 14 | 2 |
| 618 | 538.34 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 619 | 538.34 | radiation | 1 | 43200 | < th | dose independent | rect. | 24 | 19 |
| 625 | 538.35 | radiation | 1 | 43200 | < th | dose independent | rect. | 4 | 15 |
| 627 | 538.35 | radiation | 1 | 43200 | < th | dose independent | rect. | 2 | 17 |
| 647 | 538.36 | radiation | 1 | 43200 | < th | dose independent | rect. | 2 | 23 |
| 648 | 538.36 | radiation | 1 | 43200 | < th | dose independent | rect. | 4 | 23 |
| 652 | 538.37 | radiation | 1 | 43200 | < th | dose independent | no | NA | NA |
| 660 | 538.37 | radiation | 1 | 43200 | < th | dose independent | rect. | 4 | 21 |
| 666 | 538.38 | radiation | 1 | 43200 | < th | dose independent | rect. | 16 | 9 |
| 667 | 538.38 | radiation | 1 | 43200 | < th | dose independent | rect. | 16 | 11 |
| 693 | 538.40 | radiation | 1 | 43200 | > th | dose independent | rect. | 7 | 23 |
| 718 | 538.45 | radiation | 1 | 43200 | < th | dose independent | rect. | 9 | 23 |
| 720 | 538.46 | radiation | 1 | 43200 | > th | dose independent | rect. | 9 | 23 |
| 738 | 538.48 | radiation | 1 | 1440 | > th | dose independent | rect. | 8 | 22 |
| 757 | 538.53 | temperature | 10 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 760 | 538.55 | temperature | 30 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 763 | 538.56 | radiation | 1 | 43200 | < th | dose independent | rect. | 7 | 23 |
| 786 | 538.72 | wind | 7 | 43200 | > th | dose dependent | rect. | 16 | 3 |
| 791 | 538.76 | wind | 7 | 43200 | > th | dose independent | rect. | 16 | 3 |
| 827 | 538.93 | temperature | 20 | 10 | > th | dose dependent | rect. | 20 | 10 |
| 855 | 539.05 | temperature | 10 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 878 | 539.15 | temperature | 30 | 43200 | < th | dose dependent | rect. | 22 | 1 |