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Os04g0120200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.69 (0.0317) R2 : 0.738
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.36 (0.0879) R2dC : 0.56 R2C : 0.175
β3 : 2.09 (0.148) R2dE : 0.157 R2E : -0.272
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.63 (0.067) R2dN8 : 0.452 R2N8 : 0.321
σ : 0.594
deviance : 162.87
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C
peak time of C : 0.88
E
wheather : temperature
threshold : 41.58
memory length : 284
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 0.0429
open length of G : 20.8

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
150.38 0.576 6.65 0.607 1.98 2.25 0.0738 1.35 1.81 0.602 31.32 254 0.3 20.3
152.05 0.574 6.64 0.732 2.09 2.23 -0.319 -- 1.81 0.623 32.56 253 0.346 20.1
150.37 0.571 6.65 0.609 1.98 2.24 -- 1.28 1.81 0.611 31.39 250 0.332 20.3
152.4 0.575 6.64 0.746 2.09 2.23 -- -- 1.82 0.627 32.36 258 0.334 20
247.65 0.733 6.58 0.79 -- 2.91 -- 2.03 2.04 -- 31.99 10 0.582 23.4
214.83 0.687 6.67 0.361 1.83 -- 0.227 -- 1.58 2.07 -- -- -- --
215.02 0.687 6.67 0.354 1.83 -- -- -- 1.58 2.06 -- -- -- --
253.61 0.742 6.54 1 -- 3.43 -- -- 2.1 -- 36.74 7 0.15 23.8
162.87 0.594 6.69 -- 2.36 2.09 -- -- 1.63 0.88 41.58 284 0.0429 20.8
415.96 0.953 6.65 0.43 -- -- -- -- 1.62 -- -- -- -- --
218.33 0.691 6.68 -- 1.84 -- -- -- 1.54 2.07 -- -- -- --
280.98 0.781 6.58 -- -- 3.06 -- -- 1.93 -- 34.32 11 0.629 23.4
420.84 0.958 6.66 -- -- -- -- -- 1.58 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 152.00 temperature 30.0 270 < th dose dependent rect. 24 20
9 155.79 temperature 30.0 90 < th dose dependent rect. 3 19
11 157.05 temperature 25.0 270 < th dose independent rect. 1 19
16 158.36 temperature 30.0 10 < th dose dependent rect. 2 21
17 158.37 temperature 30.0 10 < th dose dependent rect. 4 19
41 161.12 temperature 10.0 270 > th dose dependent rect. 8 16
79 165.60 temperature 10.0 270 > th dose dependent rect. 5 21
84 165.97 radiation 1.0 14400 < th dose dependent rect. 24 1
99 167.84 temperature 20.0 10 > th dose dependent rect. 8 20
110 168.70 temperature 20.0 10 > th dose dependent rect. 8 18
112 168.93 radiation 1.0 14400 < th dose dependent rect. 24 3
160 171.30 temperature 20.0 10 > th dose dependent rect. 8 16
172 171.52 precipitation 0.1 14400 > th dose dependent rect. 17 1
190 171.90 temperature 15.0 270 > th dose dependent rect. 17 22
203 172.21 temperature 30.0 10 < th dose dependent rect. 12 11
209 172.34 temperature 30.0 90 < th dose dependent rect. 11 11
221 172.51 temperature 10.0 10 > th dose dependent rect. 21 23
226 172.57 precipitation 0.1 4320 > th dose independent rect. 17 1
227 172.57 wind 7.0 4320 < th dose independent rect. 20 7
244 172.77 wind 7.0 4320 > th dose independent rect. 20 7
247 172.82 precipitation 0.1 4320 < th dose independent rect. 17 1
248 172.82 precipitation 0.1 4320 < th dose dependent rect. 17 1
249 172.85 temperature 30.0 10 < th dose dependent rect. 14 9
274 173.29 temperature 30.0 10 < th dose dependent rect. 9 14
290 173.48 wind 7.0 4320 < th dose independent rect. 20 5
292 173.49 wind 7.0 4320 > th dose independent rect. 20 5
308 173.70 wind 7.0 4320 > th dose dependent rect. 20 8
320 173.98 wind 5.0 4320 > th dose dependent rect. 20 1
321 173.98 temperature 30.0 90 < th dose dependent rect. 7 15
322 173.99 wind 5.0 4320 > th dose independent rect. 20 1
363 174.53 atmosphere 1005.0 14400 < th dose independent rect. 23 1
375 174.71 atmosphere 995.0 14400 > th dose independent rect. 18 3
378 174.74 atmosphere 995.0 14400 > th dose independent rect. 14 7
385 174.84 temperature 10.0 270 > th dose dependent rect. 6 10
387 174.85 atmosphere 995.0 14400 > th dose independent rect. 12 9
389 174.87 atmosphere 995.0 14400 < th dose dependent rect. 14 5
418 174.89 wind 7.0 4320 > th dose dependent rect. 20 5
428 174.90 temperature 25.0 1440 < th dose dependent rect. 17 5
432 174.93 atmosphere 995.0 14400 < th dose dependent rect. 15 2
435 174.96 atmosphere 995.0 14400 < th dose independent rect. 14 3
453 175.02 atmosphere 995.0 14400 > th dose independent rect. 8 13
522 175.16 temperature 30.0 10 < th dose dependent sin 23 NA
524 175.17 atmosphere 995.0 14400 > th dose independent rect. 15 2
551 175.37 temperature 25.0 1440 < th dose dependent rect. 17 2
572 175.46 wind 5.0 4320 < th dose independent rect. 20 1
591 175.55 precipitation 0.1 14400 > th dose dependent rect. 20 2
654 176.05 temperature 10.0 10 > th dose dependent sin 23 NA
676 176.13 temperature 20.0 10 > th dose dependent sin 22 NA
740 176.62 temperature 25.0 1440 < th dose dependent rect. 20 2
741 176.66 atmosphere 995.0 14400 > th dose independent rect. 18 1
822 177.32 temperature 20.0 10 > th dose dependent rect. 23 21
845 177.45 temperature 20.0 10 > th dose dependent rect. 8 12
877 177.64 temperature 30.0 270 < th dose dependent rect. 9 22
972 178.11 temperature 30.0 270 < th dose dependent rect. 11 22
980 178.17 atmosphere 1005.0 14400 > th dose independent rect. 22 2