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Os04g0119200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.86 (0.0224) R2 : 0.638
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.867 (0.0537) R2dC : 0.213 R2C : 0.233
β3 : 1.65 (0.0731) R2dE : 0.405 R2E : 0.425
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0172 (0.0472) R2dN8 : 0.000121 R2N8 : 0.000156
σ : 0.42
deviance : 81.46
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_____
C
peak time of C : 10.9
E
wheather : temperature
threshold : 7.407
memory length : 158
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 6.35
open length of G : 19.8

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
79.38 0.419 7.85 0.213 0.848 1.54 -0.671 0.766 0.0523 11.1 10.03 129 6.75 19.6
79.9 0.416 7.85 0.189 0.863 1.57 -0.548 -- 0.0511 10.9 9.033 127 6.73 19.7
80.84 0.419 7.85 0.212 0.872 1.52 -- 0.645 0.04 11.1 8.159 133 6.62 19.8
80.86 0.419 7.85 0.16 0.881 1.6 -- -- 0.0376 11.1 6.656 156 6.35 19.9
113.35 0.496 7.91 -0.0293 -- 1.89 -- 0.0131 -0.137 -- 16.22 41 6.64 20.1
111.65 0.495 7.85 0.338 1.36 -- 0.0506 -- 0.147 14.2 -- -- -- --
111.66 0.495 7.85 0.339 1.36 -- -- -- 0.147 14.2 -- -- -- --
112.04 0.493 7.91 0.0177 -- 1.9 -- -- -0.111 -- 16.56 27 6.75 20.1
81.46 0.42 7.86 -- 0.867 1.65 -- -- 0.0172 10.9 7.407 158 6.35 19.8
222.63 0.697 7.86 0.282 -- -- -- -- 0.115 -- -- -- -- --
114.7 0.501 7.85 -- 1.36 -- -- -- 0.11 14.2 -- -- -- --
111.64 0.492 7.91 -- -- 1.9 -- -- -0.106 -- 16.4 23 6.8 20.1
224.73 0.7 7.86 -- -- -- -- -- 0.0832 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 80.41 temperature 10.0 90 > th dose dependent rect. 7 20
2 80.78 temperature 30.0 90 < th dose dependent rect. 3 16
12 83.00 temperature 10.0 10 > th dose dependent rect. 8 19
67 86.23 temperature 10.0 270 > th dose dependent rect. 21 13
102 87.34 temperature 10.0 270 > th dose dependent rect. 5 9
116 87.94 temperature 15.0 90 > th dose dependent rect. 23 12
123 88.13 temperature 10.0 90 > th dose dependent sin 4 NA
153 88.82 temperature 30.0 90 < th dose independent rect. 3 16
162 89.03 temperature 30.0 270 < th dose independent rect. 1 16
163 89.04 temperature 30.0 90 < th dose dependent rect. 3 4
238 90.17 temperature 15.0 270 > th dose dependent rect. 5 6
248 90.29 temperature 25.0 270 < th dose independent rect. 2 3
265 90.42 temperature 10.0 10 > th dose dependent rect. 7 11
280 90.64 wind 9.0 270 < th dose independent rect. 5 21
288 90.70 temperature 25.0 270 < th dose independent rect. 1 10
289 90.72 wind 1.0 270 > th dose independent rect. 3 1
291 90.74 temperature 25.0 90 < th dose independent rect. 3 5
308 90.90 temperature 30.0 90 < th dose dependent sin 4 NA
311 90.92 wind 9.0 270 < th dose independent rect. 4 23
317 91.00 temperature 25.0 270 < th dose independent rect. 1 12
360 91.35 precipitation 0.1 270 < th dose independent rect. 2 3
361 91.35 wind 9.0 90 < th dose independent rect. 7 20
363 91.35 precipitation 0.1 270 < th dose dependent rect. 2 3
370 91.38 temperature 25.0 90 < th dose independent rect. 3 8
379 91.42 wind 5.0 270 < th dose independent rect. 2 3
384 91.45 temperature 30.0 270 < th dose dependent rect. 3 1
385 91.45 radiation 1.0 270 < th dose dependent rect. 2 9
412 91.59 precipitation 0.1 270 < th dose independent rect. 5 21
414 91.59 precipitation 0.1 270 < th dose dependent rect. 5 21
430 91.75 radiation 1.0 270 < th dose dependent rect. 2 3
431 91.75 humidity 60.0 90 > th dose dependent rect. 3 16
434 91.77 temperature 10.0 270 > th dose independent rect. 2 3
437 91.77 humidity 50.0 270 > th dose independent rect. 2 3
440 91.77 atmosphere 995.0 270 > th dose independent rect. 2 3
441 91.77 atmosphere 1010.0 270 < th dose independent rect. 2 3
443 91.77 radiation 20.0 270 < th dose independent rect. 2 3
446 91.77 temperature 10.0 270 > th dose independent rect. 5 21
447 91.78 radiation 40.0 270 < th dose dependent rect. 2 3
450 91.79 radiation 20.0 270 < th dose dependent rect. 2 3
458 91.83 radiation 1.0 270 < th dose independent rect. 2 3
466 91.85 radiation 30.0 90 < th dose dependent rect. 3 5
484 91.95 precipitation 0.1 90 < th dose independent rect. 7 20
485 91.95 precipitation 0.1 90 < th dose dependent rect. 7 20
487 91.98 temperature 25.0 90 < th dose independent rect. 3 10
495 92.04 wind 9.0 90 < th dose dependent rect. 3 4
526 92.19 temperature 10.0 90 > th dose independent rect. 7 20
562 92.38 radiation 1.0 270 < th dose independent rect. 2 9
595 92.55 precipitation 0.1 270 < th dose independent rect. 3 1
596 92.55 precipitation 0.1 270 < th dose dependent rect. 3 1
602 92.57 humidity 50.0 90 > th dose dependent rect. 3 4
613 92.61 radiation 1.0 270 < th dose dependent rect. 1 18
616 92.64 wind 5.0 270 < th dose independent rect. 1 5
622 92.66 wind 5.0 270 < th dose independent rect. 3 1
626 92.67 precipitation 0.1 270 < th dose independent rect. 1 5
627 92.67 precipitation 0.1 270 < th dose dependent rect. 1 5
648 92.74 temperature 30.0 270 < th dose independent rect. 11 19
664 92.80 radiation 1.0 270 < th dose dependent sin 3 NA
678 92.86 temperature 30.0 270 < th dose independent rect. 10 9
709 92.97 temperature 30.0 270 < th dose independent rect. 14 16
715 93.00 wind 7.0 270 < th dose independent rect. 5 10
720 93.01 temperature 25.0 270 > th dose independent rect. 23 12
729 93.04 temperature 10.0 270 > th dose independent rect. 1 5
732 93.04 humidity 50.0 270 > th dose independent rect. 1 5
735 93.04 atmosphere 995.0 270 > th dose independent rect. 1 5
736 93.04 atmosphere 1015.0 270 < th dose independent rect. 1 5
737 93.04 radiation 20.0 270 < th dose independent rect. 1 5
748 93.05 atmosphere 995.0 270 > th dose dependent rect. 2 3
749 93.05 radiation 30.0 270 < th dose dependent rect. 1 5
788 93.14 atmosphere 995.0 270 > th dose independent rect. 15 14
790 93.15 precipitation 0.1 10 < th dose independent rect. 3 5
792 93.15 precipitation 0.1 10 < th dose dependent rect. 3 5
803 93.20 radiation 1.0 270 > th dose independent sin 3 NA
808 93.20 humidity 60.0 90 > th dose dependent rect. 3 12
811 93.21 atmosphere 995.0 270 > th dose dependent rect. 11 9
813 93.22 temperature 10.0 270 > th dose independent rect. 3 1
816 93.22 humidity 50.0 270 > th dose independent rect. 3 1
819 93.22 atmosphere 995.0 270 > th dose independent rect. 3 1
820 93.22 atmosphere 1010.0 270 < th dose independent rect. 3 1
822 93.22 radiation 1.0 270 < th dose independent rect. 3 1
827 93.22 precipitation 0.1 10 < th dose independent rect. 8 19
828 93.22 temperature 10.0 270 > th dose independent rect. 4 23
834 93.22 wind 9.0 270 < th dose dependent rect. 6 9
835 93.22 precipitation 0.1 10 < th dose dependent rect. 8 19
843 93.24 wind 1.0 270 > th dose independent rect. 1 5
863 93.26 humidity 50.0 10 > th dose dependent rect. 3 5
876 93.31 wind 9.0 10 < th dose dependent rect. 3 5
878 93.31 temperature 20.0 10 > th dose dependent rect. 23 19
891 93.36 temperature 15.0 10 > th dose dependent rect. 23 16
909 93.44 radiation 1.0 270 > th dose independent rect. 17 22
920 93.49 radiation 30.0 10 < th dose independent rect. 3 5
933 93.51 wind 9.0 270 < th dose dependent rect. 1 5
941 93.53 wind 7.0 10 < th dose independent rect. 3 5
970 93.57 temperature 25.0 270 < th dose independent sin 7 NA
991 93.61 radiation 40.0 90 < th dose dependent rect. 3 12
992 93.61 radiation 30.0 90 < th dose dependent rect. 15 16