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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os04g0116800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Very-long-chain fatty acid condensing enzyme CUT1 (Very-long-chain fatty acid condensing enzyme (CUT1); 56079-54227).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.08 (0.0309) R2 : 0.645
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.87 (0.0651) R2dN8 : 0.833 R2N8 : 0.645
σ : 0.582
deviance : 155.74
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
142.57 0.561 2.99 -0.539 0.18 -0.942 -0.245 -3.97 1.94 18.3 9 4351 -- --
148.68 0.568 3.08 -0.382 0.145 -0.338 -0.161 -- 1.86 18.7 8.2 4398 -- --
142.69 0.556 2.99 -0.54 0.178 -0.96 -- -4.02 1.94 18 9.003 4346 -- --
142.8 0.557 3.07 -0.26 0.121 -0.435 -- -- 1.93 18.8 11.47 4486 -- --
144.24 0.559 2.98 -0.557 -- -0.959 -- -3.91 1.95 -- 9 4398 -- --
151.29 0.577 3.09 -0.256 0.217 -- -0.317 -- 1.85 19.4 -- -- -- --
151.56 0.577 3.09 -0.249 0.216 -- -- -- 1.85 19.5 -- -- -- --
142.01 0.555 3.06 -0.269 -- -0.665 -- -- 2.04 -- 11.1 4400 -- --
142.95 0.557 3.04 -- 0.168 -0.635 -- -- 2.08 18.4 11.4 4400 -- --
154.06 0.58 3.08 -0.253 -- -- -- -- 1.85 -- -- -- -- --
153.2 0.579 3.08 -- 0.218 -- -- -- 1.88 19.4 -- -- -- --
143.52 0.558 3.03 -- -- -0.687 -- -- 2.1 -- 11.16 4394 -- --
155.74 0.582 3.08 -- -- -- -- -- 1.87 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 137.36 wind 9.0 4320 > th dose dependent rect. 14 2
2 138.05 wind 9.0 4320 > th dose independent rect. 14 2
3 138.10 temperature 30.0 720 > th dose independent rect. 13 1
4 138.16 wind 9.0 4320 < th dose independent rect. 14 2
5 138.17 wind 9.0 4320 > th dose dependent rect. 11 5
12 138.50 wind 9.0 4320 > th dose independent rect. 11 5
14 138.67 radiation 10.0 43200 < th dose dependent rect. 19 1
23 138.78 temperature 10.0 1440 > th dose independent rect. 19 1
26 138.78 temperature 30.0 1440 < th dose independent rect. 19 1
30 138.78 humidity 50.0 1440 > th dose independent rect. 19 1
32 138.78 atmosphere 995.0 1440 > th dose independent rect. 19 1
36 138.78 radiation 1.0 1440 < th dose independent rect. 19 1
56 138.78 temperature 10.0 1440 > th dose independent rect. 20 23
71 138.85 wind 9.0 4320 > th dose dependent rect. 6 10
80 139.03 temperature 25.0 30 > th dose independent rect. 18 1
87 139.07 radiation 10.0 270 > th dose independent rect. 16 1
88 139.07 atmosphere 1005.0 30 > th dose dependent rect. 18 1
90 139.08 atmosphere 1005.0 30 > th dose independent rect. 18 1
91 139.09 humidity 80.0 30 < th dose independent rect. 18 1
93 139.12 wind 7.0 30 < th dose independent rect. 18 1
94 139.12 temperature 20.0 30 > th dose dependent rect. 18 1
96 139.14 wind 3.0 30 > th dose independent rect. 18 1
112 139.14 radiation 1.0 30 < th dose dependent rect. 18 1
117 139.20 radiation 1.0 30 < th dose independent rect. 18 1
118 139.21 atmosphere 995.0 30 > th dose independent rect. 18 1
119 139.21 wind 9.0 30 < th dose dependent rect. 18 1
123 139.23 temperature 10.0 30 > th dose independent rect. 18 1
125 139.23 humidity 50.0 30 > th dose independent rect. 18 1
127 139.23 atmosphere 1010.0 30 < th dose independent rect. 18 1
129 139.23 radiation 20.0 30 < th dose independent rect. 18 1
132 139.23 precipitation 0.1 30 < th dose independent rect. 18 1
133 139.23 temperature 10.0 30 > th dose independent rect. 19 23
139 139.23 precipitation 0.1 30 < th dose dependent rect. 18 1
141 139.24 humidity 50.0 30 > th dose dependent rect. 18 1
142 139.24 humidity 90.0 30 < th dose dependent rect. 18 1
144 139.25 wind 9.0 4320 < th dose independent rect. 11 5
148 139.30 temperature 30.0 30 < th dose independent rect. 18 1
157 139.40 wind 1.0 30 > th dose dependent rect. 18 1
158 139.41 atmosphere 1015.0 30 < th dose dependent rect. 18 1
164 139.55 wind 9.0 4320 > th dose dependent rect. 23 17
188 139.72 wind 9.0 4320 > th dose independent rect. 6 10
196 139.76 wind 9.0 4320 > th dose independent rect. 9 7
204 139.81 temperature 25.0 30 > th dose independent rect. 16 10
212 139.94 temperature 30.0 30 < th dose dependent rect. 18 1
214 139.94 radiation 10.0 270 > th dose dependent rect. 16 1
244 140.14 atmosphere 995.0 30 > th dose independent rect. 19 23
248 140.16 wind 9.0 4320 > th dose dependent sin 1 NA
273 140.27 wind 9.0 4320 > th dose independent rect. 22 18
287 140.35 precipitation 0.1 30 < th dose independent rect. 19 23
288 140.35 precipitation 0.1 30 < th dose dependent rect. 19 23
292 140.45 temperature 25.0 30 > th dose dependent rect. 18 7
306 140.60 wind 9.0 4320 < th dose independent rect. 6 10
308 140.62 wind 9.0 4320 < th dose independent rect. 8 8
311 140.63 wind 9.0 4320 > th dose dependent rect. 18 22
335 140.82 wind 9.0 4320 > th dose independent sin 0 NA
357 141.04 wind 9.0 4320 < th dose independent rect. 1 15
360 141.06 wind 9.0 4320 < th dose independent rect. 23 17
387 141.22 temperature 25.0 30 > th dose dependent rect. 16 17
426 141.29 wind 9.0 4320 < th dose independent rect. 11 9
439 141.31 atmosphere 1005.0 90 > th dose dependent rect. 16 3
445 141.32 temperature 25.0 30 > th dose dependent rect. 18 15
461 141.42 wind 1.0 30 < th dose independent rect. 10 1
462 141.42 temperature 10.0 1440 > th dose independent rect. 11 1
466 141.42 atmosphere 995.0 1440 > th dose independent rect. 11 1
469 141.42 precipitation 0.1 1440 < th dose independent rect. 11 1
471 141.42 temperature 10.0 1440 > th dose independent rect. 12 23
474 141.42 wind 1.0 30 < th dose dependent rect. 10 1
475 141.42 precipitation 0.1 1440 < th dose dependent rect. 11 1
504 141.52 temperature 25.0 30 > th dose independent rect. 16 17
545 141.71 radiation 1.0 1440 > th dose independent rect. 11 1
548 141.79 humidity 70.0 30 < th dose independent rect. 10 1
550 141.81 radiation 40.0 30 < th dose independent rect. 10 1
552 141.81 wind 9.0 4320 < th dose independent rect. 13 7
554 141.82 temperature 25.0 30 > th dose dependent rect. 10 1
555 141.84 wind 9.0 4320 < th dose independent sin 0 NA
560 141.88 temperature 15.0 30 > th dose independent rect. 11 23
567 141.93 atmosphere 1005.0 30 > th dose dependent rect. 10 1
569 141.94 atmosphere 1005.0 30 > th dose independent rect. 10 1
572 141.96 atmosphere 1010.0 30 < th dose independent rect. 10 1
576 141.97 wind 9.0 4320 < th dose independent rect. 6 14
579 141.99 wind 9.0 4320 < th dose independent rect. 8 12
581 141.99 humidity 70.0 30 < th dose dependent rect. 10 1
598 142.05 temperature 25.0 30 > th dose independent rect. 10 1
601 142.05 humidity 50.0 10 > th dose independent rect. 19 23
603 142.06 radiation 20.0 30 > th dose independent rect. 10 1
606 142.06 radiation 40.0 30 < th dose dependent rect. 10 1
614 142.09 temperature 30.0 30 < th dose independent rect. 10 1
617 142.11 wind 5.0 30 < th dose dependent rect. 10 1
628 142.17 humidity 60.0 30 > th dose independent rect. 10 1
636 142.18 temperature 25.0 30 > th dose independent rect. 18 8
639 142.18 temperature 25.0 30 > th dose dependent rect. 16 15
641 142.19 wind 9.0 30 < th dose independent rect. 19 23
645 142.21 temperature 10.0 30 > th dose independent rect. 10 1
652 142.21 radiation 1.0 30 > th dose independent rect. 10 1
653 142.21 precipitation 0.1 30 < th dose independent rect. 10 1
657 142.21 wind 9.0 4320 < th dose independent rect. 1 19
659 142.21 precipitation 0.1 30 < th dose dependent rect. 10 1
663 142.23 wind 9.0 4320 < th dose independent rect. 19 21
664 142.23 wind 9.0 4320 < th dose independent rect. 23 21
665 142.24 wind 1.0 30 > th dose independent rect. 10 1
702 142.39 wind 9.0 4320 > th dose independent rect. 11 17
716 142.47 radiation 1.0 30 > th dose dependent rect. 10 1
719 142.48 temperature 25.0 30 > th dose dependent rect. 16 9
723 142.50 temperature 25.0 30 > th dose dependent rect. 16 12
745 142.53 wind 9.0 4320 > th dose independent rect. 11 23
747 142.56 humidity 50.0 30 > th dose dependent rect. 10 1
753 142.59 temperature 25.0 30 > th dose independent rect. 16 3
754 142.59 wind 9.0 30 < th dose independent rect. 11 23
770 142.66 wind 9.0 4320 > th dose independent rect. 5 19
796 142.69 wind 9.0 4320 > th dose independent rect. 9 19
804 142.70 wind 3.0 30 < th dose independent rect. 8 1
807 142.71 atmosphere 1000.0 30 > th dose independent rect. 8 1
826 142.75 wind 1.0 30 > th dose independent rect. 8 1
827 142.75 radiation 20.0 720 < th dose independent rect. 23 8
840 142.77 humidity 90.0 1440 < th dose independent rect. 11 1
861 142.81 temperature 20.0 30 > th dose independent rect. 8 1
864 142.82 radiation 20.0 30 < th dose independent rect. 8 1
871 142.84 wind 7.0 30 < th dose dependent rect. 8 1
880 142.86 wind 9.0 4320 > th dose independent no NA NA
896 142.86 wind 1.0 30 > th dose dependent rect. 10 1
898 142.86 radiation 40.0 30 < th dose dependent rect. 8 1
899 142.87 humidity 70.0 30 > th dose independent rect. 8 1
904 142.87 atmosphere 1015.0 30 < th dose dependent rect. 10 1
905 142.88 atmosphere 995.0 30 > th dose dependent rect. 8 1
908 142.89 temperature 10.0 30 > th dose independent rect. 8 1
910 142.89 temperature 30.0 30 < th dose independent rect. 8 1
911 142.89 humidity 50.0 30 > th dose independent rect. 8 1
914 142.89 atmosphere 1010.0 30 < th dose independent rect. 8 1
916 142.89 radiation 1.0 30 > th dose independent rect. 8 1
918 142.89 precipitation 0.1 30 < th dose independent rect. 8 1
919 142.89 temperature 10.0 30 > th dose independent rect. 9 23
920 142.89 precipitation 0.1 30 < th dose dependent rect. 8 1
921 142.91 humidity 50.0 30 > th dose dependent rect. 8 1
929 142.95 temperature 10.0 30 > th dose dependent rect. 8 1
935 142.99 temperature 10.0 1440 > th dose independent rect. 9 1
938 142.99 atmosphere 995.0 1440 > th dose independent rect. 9 1
941 142.99 atmosphere 1015.0 1440 < th dose independent rect. 9 1
943 142.99 wind 9.0 4320 > th dose independent rect. 13 23
944 142.99 temperature 10.0 1440 > th dose independent rect. 10 23
963 143.16 humidity 80.0 30 < th dose independent rect. 8 1
964 143.16 radiation 1.0 30 > th dose dependent rect. 8 1
966 143.17 humidity 90.0 30 < th dose dependent rect. 8 1
968 143.18 temperature 25.0 30 > th dose independent rect. 18 15
969 143.19 radiation 40.0 720 > th dose independent rect. 13 1
970 143.19 wind 9.0 4320 < th dose independent rect. 11 17
984 143.23 wind 1.0 30 > th dose dependent rect. 8 1
994 143.28 wind 9.0 4320 < th dose independent rect. 11 13
999 143.30 atmosphere 1015.0 30 < th dose dependent rect. 8 1