Os04g0115800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os04g0115800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 85.09 | 0.433 | 2.88 | -0.0257 | 0.152 | 1.95 | 0.0986 | 0.385 | 0.0463 | 4.71 | 10.34 | 33 | -- | -- |
| 83.46 | 0.425 | 2.89 | -0.0404 | 0.148 | 1.94 | -0.0113 | -- | 0.0446 | 4.59 | 10.34 | 46 | -- | -- |
| 81.93 | 0.422 | 2.88 | 0.000456 | 0.143 | 2.4 | -- | -1 | 0.0147 | 4.35 | 10.44 | 46 | -- | -- |
| 81.66 | 0.421 | 2.87 | -0.0223 | 0.171 | 2.6 | -- | -- | 0.0523 | 4.77 | 10.56 | 46 | -- | -- |
| 83.03 | 0.424 | 2.88 | -0.0463 | -- | 2.53 | -- | -0.954 | 0.0428 | -- | 10.4 | 46 | -- | -- |
| 94.07 | 0.455 | 2.89 | -0.0898 | 0.102 | -- | 0.363 | -- | 0.025 | 5.05 | -- | -- | -- | -- |
| 94.4 | 0.455 | 2.89 | -0.0905 | 0.104 | -- | -- | -- | 0.0232 | 4.78 | -- | -- | -- | -- |
| 82.76 | 0.424 | 2.88 | -0.0184 | -- | 2.62 | -- | -- | 0.0513 | -- | 10.57 | 54 | -- | -- |
| 81.48 | 0.42 | 2.88 | -- | 0.177 | 2.76 | -- | -- | 0.0502 | 4.95 | 10.56 | 52 | -- | -- |
| 94.98 | 0.455 | 2.89 | -0.0866 | -- | -- | -- | -- | 0.0259 | -- | -- | -- | -- | -- |
| 94.62 | 0.455 | 2.88 | -- | 0.102 | -- | -- | -- | 0.0333 | 4.81 | -- | -- | -- | -- |
| 82.77 | 0.424 | 2.88 | -- | -- | 2.62 | -- | -- | 0.0534 | -- | 10.57 | 60 | -- | -- |
| 95.17 | 0.455 | 2.89 | -- | -- | -- | -- | -- | 0.0355 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 79.38 | radiation | 1.0 | 90 | < th | dose independent | rect. | 10 | 1 |
| 3 | 79.38 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 5 | 79.48 | radiation | 1.0 | 10 | < th | dose independent | rect. | 7 | 5 |
| 7 | 79.48 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 7 | 5 |
| 9 | 79.50 | radiation | 1.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 26 | 79.50 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 11 | 1 |
| 43 | 79.58 | wind | 9.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 51 | 79.58 | wind | 9.0 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 115 | 85.54 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 132 | 86.18 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 133 | 86.19 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 134 | 86.21 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 136 | 86.21 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 139 | 86.23 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 140 | 86.23 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 144 | 86.25 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 145 | 86.25 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 150 | 86.26 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 157 | 86.28 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 160 | 86.28 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 164 | 86.28 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 166 | 86.28 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 171 | 86.28 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 172 | 86.28 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 173 | 86.28 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 178 | 86.28 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 186 | 86.41 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 188 | 86.42 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 192 | 86.45 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 194 | 86.49 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 207 | 86.58 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 209 | 86.58 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 212 | 86.58 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 216 | 86.58 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 225 | 86.58 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 226 | 86.58 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 246 | 86.58 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 249 | 86.58 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 329 | 87.40 | wind | 7.0 | 270 | > th | dose dependent | rect. | 12 | 1 |
| 354 | 87.74 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 355 | 87.74 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 367 | 87.88 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 379 | 87.97 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 384 | 88.06 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 15 | 1 |
| 429 | 88.26 | radiation | 20.0 | 10 | < th | dose independent | rect. | 11 | 5 |
| 483 | 88.58 | humidity | 70.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 547 | 88.78 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 574 | 89.06 | radiation | 20.0 | 10 | < th | dose independent | rect. | 12 | 1 |
| 621 | 89.19 | wind | 1.0 | 10 | > th | dose independent | rect. | 16 | 23 |
| 653 | 89.39 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 801 | 89.67 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 15 | 1 |
| 852 | 89.82 | radiation | 20.0 | 10 | < th | dose independent | rect. | 2 | 14 |
| 871 | 89.89 | wind | 9.0 | 30 | > th | dose dependent | sin | 17 | NA |
| 919 | 90.05 | wind | 3.0 | 10 | < th | dose independent | rect. | 12 | 1 |
| 957 | 90.17 | radiation | 20.0 | 10 | < th | dose independent | rect. | 11 | 17 |
| 979 | 90.22 | wind | 9.0 | 30 | < th | dose independent | sin | 17 | NA |