Os04g0109900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Exostosin-like family protein.
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Os04g0109900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Exostosin-like family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 314.04 | 0.833 | 3.34 | -0.485 | 0.184 | -1.28 | -0.161 | -0.303 | 0.0647 | 7.53 | 7.189 | 26 | -- | -- |
| 314.06 | 0.825 | 3.34 | -0.49 | 0.182 | -1.2 | -0.157 | -- | 0.0656 | 7.53 | 7.131 | 25 | -- | -- |
| 314.11 | 0.825 | 3.34 | -0.49 | 0.184 | -1.28 | -- | -0.288 | 0.0643 | 7.45 | 7.178 | 25 | -- | -- |
| 314.13 | 0.825 | 3.34 | -0.495 | 0.183 | -1.2 | -- | -- | 0.0656 | 7.47 | 7.199 | 25 | -- | -- |
| 315.89 | 0.828 | 3.35 | -0.496 | -- | -1.19 | -- | -0.144 | 0.066 | -- | 7.129 | 25 | -- | -- |
| 325.24 | 0.845 | 3.35 | -0.656 | 0.158 | -- | -0.307 | -- | 0.0149 | 10.7 | -- | -- | -- | -- |
| 325.57 | 0.845 | 3.35 | -0.67 | 0.165 | -- | -- | -- | 0.0131 | 9.92 | -- | -- | -- | -- |
| 315.9 | 0.828 | 3.35 | -0.498 | -- | -1.15 | -- | -- | 0.0667 | -- | 7.194 | 25 | -- | -- |
| 320.16 | 0.833 | 3.33 | -- | 0.187 | -1.42 | -- | -- | 0.127 | 7.26 | 7.101 | 25 | -- | -- |
| 327.21 | 0.845 | 3.36 | -0.672 | -- | -- | -- | -- | 0.013 | -- | -- | -- | -- | -- |
| 337.39 | 0.859 | 3.34 | -- | 0.168 | -- | -- | -- | 0.0876 | 10.2 | -- | -- | -- | -- |
| 322.01 | 0.836 | 3.33 | -- | -- | -1.37 | -- | -- | 0.128 | -- | 7.112 | 25 | -- | -- |
| 339.11 | 0.86 | 3.34 | -- | -- | -- | -- | -- | 0.0875 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 304.59 | wind | 5 | 270 | > th | dose dependent | rect. | 7 | 2 |
| 3 | 305.16 | wind | 5 | 30 | > th | dose dependent | rect. | 7 | 8 |
| 5 | 305.34 | wind | 5 | 30 | > th | dose dependent | rect. | 9 | 6 |
| 10 | 305.40 | wind | 5 | 270 | > th | dose dependent | rect. | 6 | 5 |
| 18 | 305.65 | wind | 7 | 270 | > th | dose independent | rect. | 7 | 4 |
| 21 | 305.66 | wind | 7 | 30 | > th | dose independent | rect. | 7 | 7 |
| 29 | 305.83 | wind | 7 | 30 | > th | dose independent | rect. | 9 | 5 |
| 37 | 306.08 | wind | 5 | 30 | > th | dose dependent | rect. | 23 | 16 |
| 58 | 306.29 | radiation | 30 | 1440 | < th | dose independent | rect. | 16 | 6 |
| 107 | 306.79 | radiation | 30 | 1440 | < th | dose independent | rect. | 16 | 8 |
| 162 | 307.13 | radiation | 30 | 1440 | < th | dose independent | rect. | 16 | 13 |
| 183 | 307.29 | radiation | 30 | 1440 | < th | dose independent | rect. | 16 | 4 |
| 203 | 307.39 | wind | 5 | 30 | > th | dose dependent | rect. | 20 | 19 |
| 238 | 307.67 | wind | 5 | 30 | > th | dose dependent | rect. | 18 | 21 |
| 266 | 307.92 | wind | 7 | 30 | > th | dose independent | sin | 5 | NA |
| 279 | 308.08 | wind | 7 | 30 | > th | dose independent | rect. | 20 | 18 |
| 296 | 308.16 | wind | 7 | 30 | > th | dose dependent | sin | 6 | NA |
| 302 | 308.19 | radiation | 30 | 1440 | < th | dose independent | rect. | 16 | 15 |
| 323 | 308.30 | wind | 7 | 30 | > th | dose independent | rect. | 18 | 20 |
| 394 | 308.77 | wind | 7 | 30 | < th | dose independent | sin | 5 | NA |
| 451 | 309.15 | wind | 7 | 30 | < th | dose independent | rect. | 1 | 22 |
| 482 | 309.27 | wind | 7 | 30 | < th | dose independent | rect. | 1 | 20 |
| 724 | 310.33 | radiation | 10 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 740 | 310.42 | radiation | 30 | 4320 | > th | dose independent | rect. | 16 | 1 |