Os04g0103500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Curculin-like (mannose-binding) lectin domain containing protein.
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Os04g0103500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Curculin-like (mannose-binding) lectin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 198.96 | 0.663 | 6.06 | 3.15 | 1.21 | -1.79 | 0.432 | 7.75 | 0.645 | 16.8 | 25.34 | 5612 | -- | -- |
| 215.5 | 0.684 | 6.21 | 2.04 | 1.2 | -1.78 | 0.0156 | -- | 0.763 | 16.6 | 14.9 | 17175 | -- | -- |
| 198.69 | 0.657 | 6.03 | 3.58 | 1.22 | -2.02 | -- | 10 | 0.59 | 16.7 | 26.87 | 5577 | -- | -- |
| 214.51 | 0.682 | 6.19 | 1.99 | 1.23 | -1.78 | -- | -- | 0.765 | 16.8 | 10.4 | 17050 | -- | -- |
| 275.08 | 0.772 | 6.03 | 3.62 | -- | -2.2 | -- | 10.6 | 0.483 | -- | 27.41 | 5577 | -- | -- |
| 262.18 | 0.759 | 6.35 | 0.63 | 1.27 | -- | 0.44 | -- | 0.0352 | 16.6 | -- | -- | -- | -- |
| 262.7 | 0.759 | 6.35 | 0.632 | 1.27 | -- | -- | -- | 0.0374 | 16.6 | -- | -- | -- | -- |
| 294.36 | 0.799 | 6.17 | 2.01 | -- | -1.88 | -- | -- | 0.792 | -- | 10.4 | 15638 | -- | -- |
| 242.86 | 0.726 | 6.32 | -- | 1.16 | -0.79 | -- | -- | 0.233 | 16.8 | 26.48 | 8383 | -- | -- |
| 348.69 | 0.873 | 6.34 | 0.584 | -- | -- | -- | -- | 0.00413 | -- | -- | -- | -- | -- |
| 273.24 | 0.773 | 6.37 | -- | 1.26 | -- | -- | -- | -0.033 | 16.6 | -- | -- | -- | -- |
| 316.71 | 0.829 | 6.32 | -- | -- | -0.878 | -- | -- | 0.128 | -- | 26.9 | 7031 | -- | -- |
| 357.68 | 0.883 | 6.36 | -- | -- | -- | -- | -- | -0.0606 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 200.58 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 13 |
| 4 | 200.65 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 9 |
| 20 | 201.35 | temperature | 25 | 1440 | > th | dose dependent | sin | 14 | NA |
| 48 | 202.54 | temperature | 25 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 57 | 202.63 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 17 |
| 62 | 202.71 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 13 |
| 68 | 202.80 | temperature | 25 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 69 | 202.83 | temperature | 25 | 1440 | > th | dose independent | rect. | 17 | 6 |
| 71 | 202.84 | temperature | 25 | 43200 | > th | dose dependent | rect. | 14 | 4 |
| 72 | 202.84 | temperature | 25 | 43200 | > th | dose dependent | rect. | 12 | 6 |
| 167 | 203.06 | temperature | 25 | 43200 | > th | dose dependent | sin | 19 | NA |
| 372 | 203.31 | temperature | 25 | 43200 | > th | dose dependent | no | NA | NA |
| 397 | 203.37 | temperature | 20 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 421 | 203.47 | temperature | 25 | 43200 | > th | dose dependent | rect. | 14 | 23 |
| 432 | 203.54 | temperature | 25 | 43200 | > th | dose independent | rect. | 16 | 10 |
| 438 | 203.57 | temperature | 25 | 1440 | > th | dose independent | rect. | 19 | 4 |
| 439 | 203.58 | temperature | 25 | 43200 | < th | dose independent | rect. | 16 | 11 |
| 441 | 203.59 | temperature | 25 | 1440 | < th | dose independent | rect. | 17 | 6 |
| 458 | 203.67 | temperature | 25 | 43200 | < th | dose independent | rect. | 15 | 19 |
| 463 | 203.69 | temperature | 25 | 43200 | > th | dose independent | rect. | 15 | 19 |
| 466 | 203.70 | temperature | 25 | 43200 | < th | dose independent | sin | 13 | NA |
| 469 | 203.71 | temperature | 25 | 43200 | > th | dose independent | sin | 14 | NA |
| 473 | 203.72 | temperature | 25 | 43200 | > th | dose independent | rect. | 15 | 15 |
| 528 | 203.85 | temperature | 25 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 536 | 203.87 | temperature | 30 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 537 | 203.87 | temperature | 25 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 553 | 203.92 | temperature | 30 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 556 | 203.92 | temperature | 25 | 43200 | < th | dose independent | rect. | 21 | 16 |
| 557 | 203.92 | temperature | 25 | 43200 | < th | dose independent | rect. | 18 | 19 |
| 560 | 203.93 | temperature | 25 | 1440 | < th | dose independent | rect. | 20 | 3 |
| 568 | 203.94 | temperature | 25 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 573 | 203.94 | wind | 1 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 584 | 203.97 | temperature | 25 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 595 | 203.99 | temperature | 25 | 43200 | < th | dose independent | sin | 7 | NA |
| 612 | 204.00 | temperature | 25 | 43200 | > th | dose independent | rect. | 21 | 16 |
| 636 | 204.04 | temperature | 20 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 637 | 204.04 | temperature | 20 | 43200 | > th | dose dependent | rect. | 23 | 3 |
| 646 | 204.05 | temperature | 20 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 674 | 204.10 | temperature | 25 | 43200 | > th | dose independent | sin | 6 | NA |
| 855 | 204.44 | temperature | 25 | 43200 | > th | dose independent | rect. | 5 | 6 |
| 856 | 204.44 | temperature | 25 | 43200 | > th | dose independent | rect. | 3 | 9 |
| 895 | 204.51 | temperature | 20 | 43200 | > th | dose dependent | sin | 10 | NA |
| 914 | 204.55 | temperature | 25 | 43200 | > th | dose independent | no | NA | NA |
| 918 | 204.55 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 951 | 204.61 | temperature | 25 | 43200 | > th | dose independent | rect. | 3 | 23 |
| 952 | 204.61 | temperature | 25 | 43200 | > th | dose independent | rect. | 5 | 23 |
| 962 | 204.63 | temperature | 25 | 43200 | < th | dose independent | no | NA | NA |
| 979 | 204.66 | temperature | 25 | 43200 | > th | dose independent | rect. | 8 | 23 |
| 982 | 204.66 | temperature | 25 | 43200 | > th | dose independent | rect. | 22 | 23 |