Os03g0861800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os03g0861800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8.08 | 0.134 | 11.8 | -0.0277 | 0.129 | -0.608 | -0.326 | -0.607 | 0.145 | 7.66 | 16 | 357 | -- | -- |
| 8.3 | 0.134 | 11.8 | 0.0882 | 0.117 | -0.606 | -0.266 | -- | 0.18 | 8.32 | 17.27 | 339 | -- | -- |
| 8.35 | 0.135 | 11.8 | -0.00814 | 0.133 | -0.576 | -- | -0.403 | 0.152 | 7.49 | 16.5 | 352 | -- | -- |
| 8.39 | 0.135 | 11.8 | 0.0571 | 0.127 | -0.53 | -- | -- | 0.172 | 7.38 | 19.11 | 365 | -- | -- |
| 9.05 | 0.14 | 11.8 | 0.0233 | -- | -0.682 | -- | -0.362 | 0.169 | -- | 16.65 | 400 | -- | -- |
| 13.14 | 0.17 | 11.8 | -0.0758 | 0.312 | -- | -0.011 | -- | 0.0758 | 6.28 | -- | -- | -- | -- |
| 13.14 | 0.17 | 11.8 | -0.0759 | 0.312 | -- | -- | -- | 0.0758 | 6.27 | -- | -- | -- | -- |
| 8.95 | 0.139 | 11.8 | 0.0517 | -- | -0.577 | -- | -- | 0.179 | -- | 21.74 | 413 | -- | -- |
| 8.43 | 0.135 | 11.8 | -- | 0.132 | -0.508 | -- | -- | 0.16 | 7.61 | 19.95 | 348 | -- | -- |
| 18.18 | 0.199 | 11.8 | -0.0675 | -- | -- | -- | -- | 0.0826 | -- | -- | -- | -- | -- |
| 13.29 | 0.171 | 11.8 | -- | 0.311 | -- | -- | -- | 0.0843 | 6.28 | -- | -- | -- | -- |
| 9.01 | 0.14 | 11.8 | -- | -- | -0.568 | -- | -- | 0.164 | -- | 22.15 | 396 | -- | -- |
| 18.3 | 0.2 | 11.8 | -- | -- | -- | -- | -- | 0.0901 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 7.78 | temperature | 20 | 270 | > th | dose dependent | rect. | 22 | 21 |
| 5 | 7.85 | temperature | 20 | 30 | > th | dose dependent | rect. | 1 | 19 |
| 18 | 7.98 | temperature | 20 | 30 | > th | dose dependent | rect. | 3 | 17 |
| 62 | 8.18 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 76 | 8.20 | temperature | 20 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 97 | 8.26 | temperature | 20 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 154 | 8.36 | temperature | 20 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 158 | 8.38 | temperature | 20 | 720 | > th | dose dependent | sin | 5 | NA |
| 204 | 8.45 | temperature | 20 | 720 | > th | dose dependent | sin | 2 | NA |
| 287 | 8.56 | temperature | 25 | 270 | > th | dose dependent | rect. | 6 | 21 |
| 363 | 8.60 | temperature | 25 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 398 | 8.63 | temperature | 30 | 270 | < th | dose independent | rect. | 16 | 23 |
| 572 | 8.75 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 592 | 8.77 | temperature | 30 | 270 | < th | dose independent | rect. | 14 | 23 |
| 650 | 8.81 | temperature | 30 | 720 | < th | dose independent | rect. | 9 | 8 |
| 670 | 8.82 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 702 | 8.84 | temperature | 30 | 720 | < th | dose independent | sin | 23 | NA |
| 704 | 8.84 | temperature | 30 | 270 | < th | dose independent | no | NA | NA |
| 723 | 8.85 | temperature | 25 | 720 | > th | dose dependent | rect. | 6 | 8 |
| 745 | 8.86 | temperature | 30 | 720 | < th | dose independent | rect. | 5 | 16 |
| 746 | 8.86 | temperature | 30 | 270 | > th | dose independent | rect. | 17 | 23 |
| 770 | 8.87 | temperature | 30 | 720 | < th | dose independent | rect. | 5 | 23 |
| 794 | 8.88 | temperature | 30 | 270 | > th | dose independent | no | NA | NA |
| 797 | 8.88 | temperature | 30 | 270 | > th | dose independent | rect. | 8 | 11 |
| 892 | 8.88 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 911 | 8.89 | temperature | 30 | 270 | > th | dose independent | rect. | 15 | 23 |
| 954 | 8.91 | temperature | 30 | 270 | > th | dose independent | sin | 23 | NA |
| 957 | 8.91 | temperature | 30 | 720 | < th | dose independent | rect. | 8 | 23 |
| 975 | 8.92 | temperature | 30 | 720 | > th | dose independent | sin | 5 | NA |