Os03g0861200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0861200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 274.84 | 0.779 | 4.34 | 0.974 | 0.679 | -1.6 | -0.221 | -1.11 | -0.129 | 5.47 | 22 | 1003 | -- | -- |
| 277.81 | 0.776 | 4.31 | 1.28 | 0.69 | -1.53 | -0.124 | -- | -0.044 | 5.5 | 22.1 | 1014 | -- | -- |
| 274.92 | 0.772 | 4.34 | 0.98 | 0.686 | -1.6 | -- | -1.11 | -0.125 | 5.53 | 22 | 1025 | -- | -- |
| 277.79 | 0.776 | 4.3 | 1.3 | 0.733 | -1.55 | -- | -- | -0.0345 | 5.84 | 22.1 | 1141 | -- | -- |
| 295.89 | 0.801 | 4.34 | 1.05 | -- | -1.51 | -- | -0.679 | -0.1 | -- | 22.04 | 714 | -- | -- |
| 371.19 | 0.903 | 4.41 | 0.743 | 0.728 | -- | 0.204 | -- | -0.546 | 6.91 | -- | -- | -- | -- |
| 371.29 | 0.902 | 4.41 | 0.747 | 0.729 | -- | -- | -- | -0.547 | 6.87 | -- | -- | -- | -- |
| 296.97 | 0.803 | 4.32 | 1.25 | -- | -1.48 | -- | -- | -0.0475 | -- | 22.11 | 686 | -- | -- |
| 316.73 | 0.829 | 4.35 | -- | 0.704 | -1.21 | -- | -- | -0.255 | 5.68 | 22.3 | 978 | -- | -- |
| 399.12 | 0.934 | 4.43 | 0.762 | -- | -- | -- | -- | -0.533 | -- | -- | -- | -- | -- |
| 385.98 | 0.919 | 4.43 | -- | 0.737 | -- | -- | -- | -0.63 | 6.81 | -- | -- | -- | -- |
| 335.44 | 0.853 | 4.36 | -- | -- | -1.24 | -- | -- | -0.245 | -- | 22.2 | 673 | -- | -- |
| 414.45 | 0.95 | 4.45 | -- | -- | -- | -- | -- | -0.617 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 280.43 | temperature | 25 | 1440 | < th | dose dependent | rect. | 15 | 14 |
| 16 | 280.89 | temperature | 25 | 1440 | < th | dose dependent | sin | 15 | NA |
| 22 | 280.99 | temperature | 25 | 1440 | < th | dose dependent | rect. | 11 | 18 |
| 29 | 281.21 | temperature | 25 | 720 | < th | dose dependent | rect. | 15 | 21 |
| 41 | 281.49 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 51 | 281.63 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 23 |
| 64 | 281.82 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 77 | 282.01 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 82 | 282.06 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 95 | 282.25 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 100 | 282.30 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 137 | 282.79 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 147 | 282.88 | temperature | 15 | 1440 | > th | dose dependent | rect. | 24 | 5 |
| 195 | 283.33 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 2 |
| 317 | 284.42 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 524 | 286.14 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 568 | 286.46 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 623 | 287.05 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 17 |
| 692 | 287.78 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 19 |
| 697 | 287.84 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 20 |
| 767 | 288.46 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 824 | 289.00 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 874 | 289.38 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 886 | 289.50 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 915 | 289.72 | temperature | 15 | 1440 | > th | dose dependent | sin | 10 | NA |
| 941 | 290.03 | temperature | 15 | 270 | > th | dose dependent | sin | 7 | NA |