Os03g0859500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ABC transporter related domain containing protein.
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Os03g0859500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ABC transporter related domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53.05 | 0.342 | 8.07 | -0.477 | 1.84 | -1.7 | -0.534 | -0.926 | 0.316 | 22.3 | 29.7 | 1673 | -- | -- |
| 53.72 | 0.341 | 8.09 | -0.671 | 1.84 | -1.67 | -0.545 | -- | 0.302 | 22.3 | 31.4 | 1674 | -- | -- |
| 54.21 | 0.343 | 8.07 | -0.462 | 1.85 | -1.7 | -- | -0.911 | 0.316 | 22.3 | 29.69 | 1672 | -- | -- |
| 54.91 | 0.345 | 8.09 | -0.655 | 1.84 | -1.68 | -- | -- | 0.3 | 22.4 | 31.3 | 1674 | -- | -- |
| 169.53 | 0.606 | 8.09 | -0.947 | -- | -2.98 | -- | 0.18 | 0.0779 | -- | 30.99 | 797 | -- | -- |
| 100.59 | 0.47 | 8.01 | -0.126 | 1.87 | -- | -0.484 | -- | 0.644 | 22.3 | -- | -- | -- | -- |
| 101.53 | 0.472 | 8.01 | -0.107 | 1.87 | -- | -- | -- | 0.645 | 22.3 | -- | -- | -- | -- |
| 169.42 | 0.606 | 8.08 | -0.898 | -- | -2.99 | -- | -- | 0.0956 | -- | 30.73 | 793 | -- | -- |
| 63.77 | 0.372 | 8.04 | -- | 1.65 | -1.46 | -- | -- | 0.459 | 22 | 33.11 | 1020 | -- | -- |
| 315.43 | 0.83 | 7.96 | -0.0779 | -- | -- | -- | -- | 0.65 | -- | -- | -- | -- | -- |
| 101.83 | 0.472 | 8.01 | -- | 1.87 | -- | -- | -- | 0.657 | 22.3 | -- | -- | -- | -- |
| 188.17 | 0.639 | 8.05 | -- | -- | -2.67 | -- | -- | 0.27 | -- | 31.68 | 787 | -- | -- |
| 315.59 | 0.829 | 7.96 | -- | -- | -- | -- | -- | 0.659 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 51.53 | temperature | 30 | 1440 | < th | dose dependent | rect. | 2 | 9 |
| 3 | 51.59 | temperature | 10 | 1440 | > th | dose dependent | rect. | 2 | 9 |
| 7 | 51.67 | temperature | 15 | 720 | > th | dose dependent | rect. | 16 | 21 |
| 8 | 51.69 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 7 |
| 55 | 52.19 | temperature | 30 | 1440 | < th | dose dependent | sin | 5 | NA |
| 66 | 52.27 | temperature | 10 | 1440 | > th | dose dependent | sin | 6 | NA |
| 133 | 52.61 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 18 |
| 171 | 52.73 | temperature | 30 | 720 | < th | dose dependent | rect. | 21 | 21 |
| 192 | 52.80 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 22 |
| 346 | 53.24 | temperature | 30 | 1440 | < th | dose dependent | rect. | 24 | 20 |
| 369 | 53.28 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 21 |
| 397 | 53.32 | temperature | 25 | 4320 | < th | dose dependent | rect. | 7 | 22 |
| 416 | 53.35 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 465 | 53.42 | temperature | 25 | 4320 | < th | dose dependent | rect. | 17 | 12 |
| 473 | 53.42 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 775 | 53.78 | temperature | 25 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 853 | 53.86 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 2 |
| 904 | 53.91 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 997 | 54.02 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 8 |