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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0859100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Lipolytic enzyme, G-D-S-L family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.21 (0.0392) R2 : 0.00633
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.141 (0.0824) R2dN8 : 0.00817 R2N8 : 0.00633
σ : 0.737
deviance : 249.64
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
236.77 0.723 3.16 0.339 0.117 1.56 -0.685 -8.56 -0.137 11.6 50.23 237 -- --
245.68 0.736 3.2 0.138 0.144 -0.299 -0.547 -- -0.116 10.5 50.23 237 -- --
238.72 0.72 3.17 0.304 0.126 1.5 -- -8.03 -0.143 12.3 50.45 240 -- --
238.41 0.719 3.2 0.0295 0.127 -1.86 -- -- -0.119 9.34 42.8 148 -- --
239.68 0.721 3.17 0.305 -- 1.56 -- -8.37 -0.141 -- 50.22 240 -- --
246.5 0.736 3.2 0.146 0.159 -- -0.524 -- -0.124 10.7 -- -- -- --
247.61 0.737 3.2 0.125 0.162 -- -- -- -0.125 11.3 -- -- -- --
238.12 0.719 3.21 0.0242 -- -2.53 -- -- -0.119 -- 43.62 117 -- --
237.12 0.717 3.2 -- 0.129 -2.49 -- -- -0.121 10.3 43.2 137 -- --
249.26 0.738 3.21 0.121 -- -- -- -- -0.127 -- -- -- -- --
248.02 0.737 3.21 -- 0.161 -- -- -- -0.139 11.3 -- -- -- --
238.14 0.719 3.21 -- -- -2.54 -- -- -0.121 -- 43.37 129 -- --
249.64 0.737 3.21 -- -- -- -- -- -0.141 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 230.38 atmosphere 1000.0 90 < th dose dependent rect. 5 3
2 230.46 atmosphere 1000.0 90 < th dose independent rect. 5 3
3 230.50 atmosphere 1000.0 10 < th dose independent rect. 4 5
4 230.52 atmosphere 1000.0 10 < th dose dependent rect. 4 5
6 230.56 atmosphere 1000.0 270 < th dose independent rect. 4 1
7 230.56 atmosphere 1000.0 270 < th dose dependent rect. 4 1
26 232.00 temperature 25.0 270 > th dose dependent rect. 4 1
28 232.03 temperature 20.0 720 > th dose independent rect. 13 7
32 232.74 wind 5.0 720 > th dose independent rect. 21 1
34 232.92 humidity 50.0 90 < th dose independent rect. 15 20
35 232.95 humidity 50.0 90 < th dose dependent sin 11 NA
38 233.19 humidity 50.0 90 < th dose independent sin 11 NA
44 233.47 humidity 50.0 90 > th dose independent sin 11 NA
49 233.89 atmosphere 1000.0 90 > th dose independent rect. 11 5
50 233.92 humidity 80.0 90 < th dose independent rect. 21 7
51 233.96 humidity 50.0 90 < th dose dependent rect. 14 22
52 234.02 humidity 80.0 90 < th dose dependent rect. 20 8
56 234.22 temperature 20.0 720 < th dose independent rect. 9 11
69 234.71 humidity 50.0 90 < th dose dependent rect. 15 20
77 234.77 wind 7.0 90 < th dose dependent rect. 11 5
80 234.84 wind 5.0 90 < th dose independent rect. 11 5
91 235.00 temperature 20.0 720 < th dose independent rect. 13 6
96 235.03 humidity 80.0 10 < th dose dependent rect. 21 8
106 235.17 temperature 20.0 270 > th dose independent rect. 14 12
111 235.25 wind 1.0 10 < th dose independent rect. 14 2
114 235.25 wind 1.0 10 < th dose dependent rect. 14 2
119 235.27 precipitation 0.1 90 > th dose dependent rect. 4 10
126 235.41 wind 1.0 90 < th dose dependent rect. 14 1
128 235.41 humidity 80.0 90 < th dose dependent rect. 20 11
136 235.54 atmosphere 1000.0 270 > th dose independent rect. 11 2
137 235.55 atmosphere 995.0 90 > th dose dependent rect. 11 5
142 235.61 humidity 80.0 90 < th dose dependent rect. 24 4
143 235.62 humidity 50.0 90 < th dose independent rect. 15 3
162 235.68 humidity 80.0 90 < th dose independent rect. 24 4
184 235.71 humidity 50.0 90 < th dose dependent rect. 15 3
201 235.72 temperature 20.0 90 > th dose independent rect. 11 5
202 235.72 temperature 10.0 90 > th dose dependent rect. 16 19
204 235.74 humidity 50.0 720 > th dose independent rect. 22 15
230 235.81 atmosphere 1015.0 1440 < th dose dependent rect. 24 1
237 235.84 precipitation 0.1 90 > th dose independent rect. 4 10
244 235.93 atmosphere 995.0 270 > th dose dependent rect. 11 2
248 235.95 temperature 10.0 270 > th dose dependent rect. 14 20
264 236.05 humidity 50.0 10 < th dose dependent rect. 15 3
313 236.12 temperature 25.0 270 > th dose independent rect. 4 1
318 236.14 humidity 80.0 90 < th dose independent rect. 1 2
324 236.16 temperature 10.0 270 > th dose dependent rect. 14 12
325 236.17 wind 3.0 10 < th dose independent rect. 12 5
327 236.17 wind 5.0 720 > th dose dependent rect. 17 6
357 236.22 temperature 10.0 720 > th dose dependent rect. 6 12
410 236.32 wind 7.0 720 > th dose independent rect. 17 4
441 236.40 atmosphere 995.0 1440 > th dose dependent rect. 24 1
456 236.50 atmosphere 1000.0 90 > th dose independent rect. 16 18
462 236.54 temperature 25.0 270 > th dose dependent rect. 3 3
465 236.55 temperature 20.0 720 > th dose dependent rect. 4 14
471 236.58 wind 7.0 720 > th dose independent rect. 17 2
477 236.59 temperature 20.0 720 > th dose dependent rect. 24 18
502 236.66 atmosphere 1000.0 270 < th dose dependent rect. 23 9
512 236.71 temperature 20.0 720 > th dose dependent rect. 14 2
515 236.71 temperature 10.0 720 > th dose dependent rect. 8 10
527 236.76 wind 5.0 90 < th dose independent rect. 21 19
529 236.76 wind 5.0 10 < th dose dependent rect. 11 6
531 236.77 radiation 10.0 10 > th dose independent sin 18 NA
536 236.78 humidity 50.0 90 < th dose dependent sin 15 NA
548 236.84 temperature 20.0 90 > th dose independent rect. 16 19
559 236.87 humidity 50.0 270 > th dose independent sin 4 NA
564 236.88 precipitation 0.1 14400 > th dose dependent rect. 20 7
592 236.94 temperature 15.0 720 > th dose dependent rect. 14 4
611 236.98 temperature 30.0 90 > th dose independent rect. 14 22
627 237.00 temperature 10.0 720 > th dose dependent rect. 11 7
631 237.01 humidity 80.0 720 < th dose dependent rect. 21 1
637 237.02 temperature 20.0 1440 > th dose independent rect. 14 3
656 237.05 atmosphere 1005.0 270 > th dose dependent rect. 10 11
674 237.11 humidity 70.0 720 < th dose dependent rect. 11 5
678 237.12 temperature 20.0 720 > th dose dependent rect. 12 4
689 237.14 temperature 20.0 720 > th dose dependent sin 0 NA
709 237.18 humidity 50.0 270 > th dose independent no NA NA
714 237.19 radiation 20.0 10 < th dose independent rect. 16 21
720 237.20 temperature 30.0 90 > th dose independent rect. 15 20
721 237.21 temperature 20.0 270 > th dose independent rect. 11 2
732 237.22 radiation 10.0 10 < th dose independent sin 17 NA
739 237.23 humidity 50.0 270 < th dose independent sin 8 NA
740 237.23 radiation 1.0 90 > th dose independent rect. 11 5
756 237.26 humidity 50.0 270 < th dose independent sin 5 NA
760 237.27 temperature 20.0 90 > th dose independent rect. 16 7
766 237.28 humidity 70.0 720 < th dose dependent rect. 14 1
767 237.28 wind 3.0 720 > th dose dependent rect. 20 2
782 237.30 humidity 50.0 720 > th dose independent rect. 7 23
812 237.35 wind 9.0 270 < th dose dependent rect. 11 2
825 237.37 humidity 50.0 720 > th dose independent rect. 22 23
829 237.38 wind 7.0 720 < th dose independent rect. 16 9
850 237.42 humidity 90.0 270 < th dose independent rect. 11 2
859 237.44 humidity 80.0 10 < th dose independent rect. 24 4
865 237.45 humidity 80.0 10 < th dose dependent rect. 24 5
876 237.46 atmosphere 1000.0 720 < th dose dependent rect. 20 3
880 237.47 atmosphere 995.0 43200 > th dose independent rect. 14 7
889 237.47 temperature 25.0 30 > th dose dependent rect. 15 21
892 237.48 atmosphere 995.0 43200 > th dose independent rect. 14 5
893 237.48 atmosphere 995.0 43200 < th dose independent rect. 14 5
900 237.48 humidity 50.0 270 < th dose independent rect. 17 20
912 237.50 humidity 80.0 90 < th dose independent rect. 20 11
947 237.55 temperature 10.0 720 > th dose dependent sin 23 NA
950 237.55 temperature 20.0 10 < th dose dependent rect. 12 9
957 237.57 wind 7.0 1440 < th dose independent rect. 17 2
959 237.57 temperature 20.0 720 > th dose independent rect. 10 6
970 237.58 atmosphere 995.0 43200 < th dose dependent rect. 15 4
976 237.59 temperature 10.0 90 > th dose dependent rect. 11 5
977 237.59 humidity 50.0 270 < th dose dependent rect. 17 20
981 237.60 humidity 50.0 270 < th dose independent rect. 17 22
987 237.60 atmosphere 1005.0 90 > th dose dependent rect. 11 17
988 237.61 wind 5.0 270 < th dose independent rect. 11 2
990 237.61 humidity 50.0 720 > th dose independent rect. 9 16
994 237.62 atmosphere 1000.0 270 > th dose independent rect. 1 8
1000 237.63 humidity 50.0 270 < th dose dependent sin 5 NA