Os03g0858200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0858200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 124.2 | 0.524 | 8 | 1.85 | 1.07 | -0.334 | 0.335 | 2.41 | 0.651 | 5.9 | 1015 | 4409 | -- | -- |
| 133.8 | 0.539 | 7.95 | 1.7 | 1.07 | -0.527 | 0.028 | -- | 0.645 | 5.85 | 1017 | 30950 | -- | -- |
| 124.46 | 0.52 | 8 | 1.85 | 1.07 | -0.338 | -- | 2.31 | 0.648 | 5.91 | 1015 | 4435 | -- | -- |
| 131.73 | 0.535 | 7.98 | 1.74 | 1.1 | -0.547 | -- | -- | 0.636 | 5.83 | 1017 | 26432 | -- | -- |
| 183.49 | 0.631 | 8.02 | 1.86 | -- | -0.445 | -- | 2.39 | 0.66 | -- | 1015 | 4437 | -- | -- |
| 140.66 | 0.556 | 7.96 | 2.22 | 1.09 | -- | 0.0212 | -- | 0.759 | 5.85 | -- | -- | -- | -- |
| 140.66 | 0.555 | 7.96 | 2.22 | 1.09 | -- | -- | -- | 0.759 | 5.85 | -- | -- | -- | -- |
| 191.7 | 0.645 | 7.98 | 1.91 | -- | -0.954 | -- | -- | 0.684 | -- | 1020 | 35341 | -- | -- |
| 189.36 | 0.641 | 8.07 | -- | 1.32 | -0.829 | -- | -- | 0.407 | 5.13 | 1017 | 30980 | -- | -- |
| 202.62 | 0.665 | 7.98 | 2.26 | -- | -- | -- | -- | 0.784 | -- | -- | -- | -- | -- |
| 271.13 | 0.77 | 8.02 | -- | 1.13 | -- | -- | -- | 0.511 | 5.76 | -- | -- | -- | -- |
| 224.31 | 0.698 | 8.12 | -- | -- | -1.85 | -- | -- | 0.173 | -- | 1015 | 47520 | -- | -- |
| 337.14 | 0.857 | 8.03 | -- | -- | -- | -- | -- | 0.534 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 121.48 | wind | 5 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 2 | 122.16 | wind | 5 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 5 | 122.92 | wind | 5 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 7 | 123.41 | wind | 5 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 8 | 123.42 | humidity | 80 | 270 | > th | dose dependent | rect. | 8 | 18 |
| 9 | 123.48 | humidity | 90 | 720 | < th | dose independent | rect. | 9 | 5 |
| 12 | 123.60 | temperature | 10 | 90 | > th | dose dependent | rect. | 18 | 14 |
| 17 | 123.84 | temperature | 25 | 270 | > th | dose independent | rect. | 16 | 5 |
| 18 | 123.93 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 23 | 21 |
| 24 | 123.99 | humidity | 70 | 14400 | < th | dose dependent | rect. | 18 | 15 |
| 30 | 124.04 | radiation | 1 | 720 | < th | dose independent | rect. | 7 | 11 |
| 33 | 124.09 | radiation | 1 | 720 | < th | dose dependent | rect. | 21 | 21 |
| 39 | 124.14 | radiation | 1 | 720 | < th | dose dependent | rect. | 6 | 12 |
| 43 | 124.16 | temperature | 25 | 90 | > th | dose independent | rect. | 18 | 13 |
| 46 | 124.18 | wind | 7 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 56 | 124.24 | wind | 5 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 58 | 124.25 | radiation | 1 | 720 | < th | dose independent | rect. | 21 | 21 |
| 65 | 124.28 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 14 | 22 |
| 86 | 124.36 | temperature | 20 | 10 | > th | dose independent | rect. | 4 | 17 |
| 93 | 124.37 | atmosphere | 1015 | 4320 | > th | dose dependent | no | NA | NA |
| 99 | 124.38 | temperature | 25 | 270 | > th | dose independent | rect. | 17 | 3 |
| 110 | 124.41 | temperature | 15 | 720 | > th | dose independent | rect. | 2 | 10 |
| 118 | 124.44 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 6 | 14 |
| 122 | 124.45 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 6 | 14 |
| 134 | 124.48 | wind | 3 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 151 | 124.53 | atmosphere | 1015 | 4320 | > th | dose dependent | sin | 0 | NA |
| 155 | 124.54 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 2 | 18 |
| 156 | 124.54 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 4 |
| 169 | 124.57 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 2 | 18 |
| 195 | 124.65 | humidity | 60 | 14400 | < th | dose independent | rect. | 18 | 15 |
| 200 | 124.65 | radiation | 1 | 720 | < th | dose dependent | rect. | 6 | 20 |
| 202 | 124.66 | atmosphere | 1015 | 4320 | > th | dose independent | sin | 22 | NA |
| 207 | 124.67 | atmosphere | 1015 | 4320 | < th | dose independent | sin | 22 | NA |
| 217 | 124.70 | humidity | 60 | 14400 | > th | dose independent | rect. | 18 | 15 |
| 241 | 124.76 | temperature | 15 | 720 | > th | dose independent | rect. | 24 | 14 |
| 245 | 124.77 | radiation | 1 | 43200 | < th | dose dependent | rect. | 19 | 3 |
| 256 | 124.82 | temperature | 15 | 30 | > th | dose dependent | rect. | 18 | 18 |
| 267 | 124.84 | temperature | 15 | 270 | > th | dose independent | rect. | 2 | 19 |
| 302 | 124.95 | wind | 9 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 318 | 124.99 | atmosphere | 1015 | 4320 | > th | dose dependent | sin | 9 | NA |
| 357 | 125.09 | wind | 9 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 360 | 125.09 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 12 | 20 |
| 374 | 125.12 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 12 | 20 |
| 391 | 125.15 | temperature | 25 | 30 | > th | dose independent | rect. | 18 | 18 |
| 410 | 125.18 | humidity | 90 | 720 | > th | dose independent | rect. | 11 | 2 |
| 417 | 125.19 | radiation | 1 | 720 | > th | dose independent | rect. | 9 | 21 |
| 428 | 125.20 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 509 | 125.31 | atmosphere | 1015 | 4320 | > th | dose independent | no | NA | NA |
| 548 | 125.37 | atmosphere | 1015 | 4320 | < th | dose independent | no | NA | NA |
| 590 | 125.47 | temperature | 25 | 90 | < th | dose independent | rect. | 8 | 20 |
| 596 | 125.48 | humidity | 60 | 14400 | < th | dose dependent | rect. | 17 | 17 |
| 598 | 125.49 | radiation | 1 | 1440 | > th | dose independent | rect. | 5 | 9 |
| 599 | 125.49 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 9 |
| 602 | 125.49 | temperature | 15 | 720 | > th | dose independent | rect. | 18 | 18 |
| 638 | 125.56 | humidity | 90 | 720 | > th | dose dependent | rect. | 11 | 2 |
| 650 | 125.59 | humidity | 60 | 14400 | < th | dose dependent | sin | 11 | NA |
| 651 | 125.59 | humidity | 90 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 657 | 125.60 | radiation | 1 | 1440 | < th | dose independent | sin | 3 | NA |
| 661 | 125.60 | radiation | 1 | 1440 | < th | dose dependent | rect. | 24 | 14 |
| 666 | 125.61 | temperature | 25 | 30 | < th | dose dependent | rect. | 9 | 19 |
| 675 | 125.63 | radiation | 1 | 720 | < th | dose independent | rect. | 7 | 19 |
| 683 | 125.64 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 12 |
| 685 | 125.65 | radiation | 1 | 1440 | > th | dose independent | sin | 3 | NA |
| 692 | 125.66 | radiation | 1 | 1440 | < th | dose independent | rect. | 24 | 14 |
| 696 | 125.66 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 9 |
| 710 | 125.69 | radiation | 1 | 1440 | < th | dose independent | rect. | 2 | 12 |
| 730 | 125.72 | temperature | 15 | 720 | > th | dose independent | rect. | 24 | 6 |
| 731 | 125.72 | radiation | 1 | 1440 | > th | dose independent | rect. | 5 | 12 |
| 746 | 125.74 | radiation | 1 | 1440 | < th | dose independent | rect. | 24 | 17 |
| 759 | 125.76 | radiation | 1 | 1440 | < th | dose independent | rect. | 2 | 15 |
| 866 | 125.90 | radiation | 1 | 720 | < th | dose independent | rect. | 8 | 7 |
| 872 | 125.90 | radiation | 1 | 720 | < th | dose dependent | rect. | 8 | 7 |
| 910 | 125.97 | temperature | 20 | 10 | > th | dose independent | rect. | 4 | 21 |
| 915 | 125.98 | humidity | 60 | 14400 | < th | dose independent | rect. | 17 | 17 |
| 937 | 126.01 | radiation | 1 | 1440 | < th | dose dependent | sin | 4 | NA |
| 938 | 126.02 | humidity | 50 | 14400 | < th | dose independent | rect. | 12 | 2 |
| 939 | 126.02 | temperature | 25 | 90 | > th | dose independent | rect. | 18 | 6 |
| 955 | 126.03 | temperature | 10 | 270 | > th | dose dependent | rect. | 16 | 14 |
| 960 | 126.04 | temperature | 15 | 270 | > th | dose dependent | rect. | 15 | 21 |