Os03g0857100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0857100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 41.15 | 0.301 | 13.1 | 0.0832 | 1.29 | 0.39 | -0.388 | -0.161 | -0.413 | 22.6 | 61.08 | 1217 | -- | -- |
| 41.14 | 0.299 | 13.1 | 0.0663 | 1.3 | 0.375 | -0.352 | -- | -0.408 | 22.6 | 62.01 | 1209 | -- | -- |
| 41.69 | 0.301 | 13.1 | 0.0877 | 1.29 | 0.373 | -- | -0.0208 | -0.41 | 22.6 | 62 | 1209 | -- | -- |
| 41.69 | 0.301 | 13.1 | 0.092 | 1.3 | 0.379 | -- | -- | -0.413 | 22.6 | 62.77 | 1209 | -- | -- |
| 132.6 | 0.539 | 13 | 0.0327 | -- | 0.453 | -- | -0.368 | -0.386 | -- | 62 | 7336 | -- | -- |
| 45.72 | 0.317 | 13 | 0.0051 | 1.24 | -- | -0.451 | -- | -0.322 | 22.4 | -- | -- | -- | -- |
| 46.55 | 0.319 | 13 | 0.0228 | 1.24 | -- | -- | -- | -0.321 | 22.5 | -- | -- | -- | -- |
| 130.3 | 0.534 | 13 | 0.0367 | -- | 0.477 | -- | -- | -0.376 | -- | 64 | 5941 | -- | -- |
| 41.91 | 0.302 | 13.1 | -- | 1.3 | 0.367 | -- | -- | -0.419 | 22.6 | 62.67 | 1209 | -- | -- |
| 141.41 | 0.556 | 13 | 0.0443 | -- | -- | -- | -- | -0.316 | -- | -- | -- | -- | -- |
| 46.56 | 0.319 | 13 | -- | 1.24 | -- | -- | -- | -0.324 | 22.5 | -- | -- | -- | -- |
| 120.44 | 0.513 | 13 | -- | -- | 0.535 | -- | -- | -0.331 | -- | 67.92 | 30409 | -- | -- |
| 141.46 | 0.555 | 13 | -- | -- | -- | -- | -- | -0.321 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.72 | radiation | 10 | 90 | < th | dose dependent | rect. | 6 | 22 |
| 7 | 39.85 | radiation | 1 | 90 | < th | dose independent | rect. | 5 | 23 |
| 21 | 40.53 | humidity | 90 | 4320 | > th | dose dependent | rect. | 4 | 1 |
| 24 | 40.60 | radiation | 1 | 30 | > th | dose independent | rect. | 12 | 18 |
| 28 | 40.72 | radiation | 1 | 30 | > th | dose independent | rect. | 9 | 21 |
| 29 | 40.73 | wind | 1 | 90 | > th | dose independent | sin | 4 | NA |
| 41 | 40.96 | radiation | 1 | 30 | < th | dose dependent | rect. | 11 | 17 |
| 46 | 40.97 | humidity | 60 | 30 | > th | dose dependent | rect. | 6 | 22 |
| 54 | 41.04 | radiation | 1 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 57 | 41.08 | radiation | 1 | 30 | < th | dose independent | rect. | 11 | 17 |
| 62 | 41.11 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 65 | 41.13 | radiation | 1 | 30 | < th | dose independent | rect. | 13 | 15 |
| 68 | 41.14 | radiation | 1 | 30 | < th | dose independent | rect. | 21 | 23 |
| 69 | 41.14 | radiation | 1 | 30 | < th | dose dependent | rect. | 15 | 13 |
| 72 | 41.15 | humidity | 80 | 1440 | < th | dose dependent | rect. | 6 | 4 |
| 73 | 41.16 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 4 |
| 76 | 41.17 | radiation | 1 | 30 | > th | dose independent | rect. | 7 | 23 |
| 84 | 41.21 | radiation | 1 | 30 | > th | dose independent | rect. | 9 | 23 |
| 86 | 41.22 | humidity | 80 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 87 | 41.22 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 8 |
| 94 | 41.25 | temperature | 25 | 30 | > th | dose dependent | rect. | 12 | 11 |
| 95 | 41.26 | humidity | 80 | 14400 | > th | dose independent | rect. | 23 | 2 |
| 96 | 41.26 | humidity | 80 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 97 | 41.26 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 8 |
| 98 | 41.26 | humidity | 80 | 14400 | > th | dose independent | rect. | 23 | 8 |
| 99 | 41.26 | radiation | 1 | 30 | < th | dose independent | rect. | 15 | 13 |
| 106 | 41.30 | humidity | 80 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 108 | 41.30 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 110 | 41.30 | wind | 3 | 43200 | < th | dose dependent | rect. | 9 | 2 |
| 122 | 41.32 | humidity | 90 | 1440 | < th | dose dependent | rect. | 5 | 9 |
| 130 | 41.35 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 5 |
| 131 | 41.35 | humidity | 80 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 133 | 41.35 | humidity | 80 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 138 | 41.36 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 13 |
| 153 | 41.40 | wind | 1 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 167 | 41.42 | wind | 1 | 4320 | > th | dose independent | rect. | 5 | 1 |
| 169 | 41.42 | humidity | 80 | 1440 | < th | dose dependent | sin | 5 | NA |
| 171 | 41.42 | temperature | 25 | 30 | > th | dose dependent | rect. | 12 | 13 |
| 180 | 41.44 | temperature | 25 | 30 | > th | dose dependent | rect. | 12 | 18 |
| 181 | 41.45 | wind | 1 | 270 | < th | dose independent | rect. | 4 | 1 |
| 190 | 41.46 | humidity | 80 | 14400 | < th | dose independent | rect. | 22 | 3 |
| 195 | 41.46 | radiation | 1 | 90 | < th | dose independent | rect. | 7 | 12 |
| 236 | 41.50 | humidity | 50 | 1440 | > th | dose dependent | rect. | 7 | 7 |
| 254 | 41.52 | humidity | 80 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 270 | 41.53 | wind | 3 | 43200 | < th | dose independent | rect. | 10 | 2 |
| 297 | 41.56 | wind | 1 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 332 | 41.60 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 19 |
| 341 | 41.61 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 12 |
| 355 | 41.63 | humidity | 80 | 1440 | > th | dose independent | rect. | 2 | 12 |
| 391 | 41.66 | humidity | 80 | 1440 | > th | dose independent | rect. | 2 | 9 |
| 398 | 41.66 | radiation | 1 | 90 | < th | dose dependent | rect. | 7 | 12 |
| 409 | 41.67 | radiation | 10 | 10 | < th | dose dependent | rect. | 6 | 8 |
| 433 | 41.70 | radiation | 1 | 10 | < th | dose dependent | sin | 16 | NA |
| 434 | 41.70 | wind | 3 | 14400 | < th | dose dependent | rect. | 3 | 2 |
| 439 | 41.71 | humidity | 50 | 1440 | > th | dose dependent | rect. | 9 | 1 |
| 461 | 41.73 | wind | 1 | 30 | > th | dose independent | sin | 23 | NA |
| 462 | 41.73 | wind | 3 | 43200 | > th | dose independent | rect. | 10 | 2 |
| 489 | 41.74 | radiation | 1 | 10 | < th | dose dependent | sin | 14 | NA |
| 503 | 41.75 | radiation | 1 | 30 | < th | dose independent | sin | 14 | NA |
| 545 | 41.77 | temperature | 25 | 30 | > th | dose dependent | rect. | 12 | 7 |
| 554 | 41.78 | wind | 3 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 556 | 41.78 | wind | 7 | 14400 | < th | dose independent | rect. | 12 | 2 |
| 558 | 41.78 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 3 |
| 564 | 41.78 | wind | 5 | 4320 | > th | dose dependent | rect. | 5 | 9 |
| 572 | 41.79 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 580 | 41.79 | humidity | 70 | 10 | > th | dose independent | rect. | 6 | 23 |
| 614 | 41.82 | radiation | 1 | 30 | < th | dose independent | sin | 16 | NA |
| 621 | 41.82 | radiation | 1 | 90 | < th | dose independent | rect. | 10 | 9 |
| 635 | 41.83 | radiation | 1 | 30 | > th | dose independent | sin | 15 | NA |
| 636 | 41.83 | wind | 7 | 14400 | > th | dose independent | rect. | 12 | 2 |
| 640 | 41.83 | humidity | 60 | 1440 | > th | dose independent | rect. | 12 | 22 |
| 644 | 41.83 | wind | 5 | 14400 | > th | dose dependent | rect. | 12 | 2 |
| 657 | 41.84 | humidity | 70 | 1440 | > th | dose independent | sin | 8 | NA |
| 661 | 41.84 | humidity | 60 | 1440 | > th | dose independent | rect. | 8 | 9 |
| 664 | 41.84 | humidity | 60 | 1440 | > th | dose independent | rect. | 18 | 23 |
| 693 | 41.85 | humidity | 70 | 1440 | > th | dose independent | rect. | 19 | 17 |
| 701 | 41.85 | radiation | 1 | 10 | < th | dose dependent | no | NA | NA |
| 711 | 41.85 | radiation | 1 | 10 | < th | dose dependent | rect. | 11 | 21 |
| 717 | 41.85 | radiation | 1 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 718 | 41.85 | radiation | 1 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 720 | 41.86 | humidity | 60 | 1440 | > th | dose independent | sin | 23 | NA |
| 810 | 41.87 | humidity | 60 | 1440 | > th | dose independent | rect. | 3 | 22 |
| 833 | 41.87 | radiation | 1 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 837 | 41.88 | humidity | 60 | 1440 | > th | dose independent | no | NA | NA |
| 875 | 41.88 | wind | 5 | 4320 | > th | dose dependent | rect. | 10 | 4 |
| 876 | 41.88 | wind | 9 | 43200 | < th | dose dependent | rect. | 10 | 4 |
| 878 | 41.88 | radiation | 1 | 90 | < th | dose dependent | rect. | 10 | 9 |
| 889 | 41.89 | humidity | 60 | 1440 | > th | dose independent | rect. | 12 | 5 |
| 894 | 41.89 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 9 |
| 912 | 41.90 | humidity | 70 | 1440 | < th | dose independent | sin | 9 | NA |
| 913 | 41.90 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 9 |
| 915 | 41.90 | wind | 3 | 43200 | > th | dose independent | rect. | 19 | 11 |
| 919 | 41.90 | humidity | 60 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 943 | 41.91 | wind | 3 | 43200 | > th | dose independent | rect. | 22 | 17 |
| 957 | 41.91 | wind | 1 | 43200 | > th | dose dependent | rect. | 10 | 4 |