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Os03g0856000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : 2OG-Fe(II) oxygenase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.4 (0.0228) R2 : 0.664
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.08 (0.0556) R2dC : 0.293 R2C : 0.343
β3 : 1.22 (0.0996) R2dE : 0.126 R2E : 0.252
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.558 (0.0495) R2dN8 : 0.131 R2N8 : 0.165
σ : 0.423
deviance : 82.65
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_____
C
peak time of C : 22.6
E
wheather : temperature
threshold : 12.52
memory length : 1141
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
78.16 0.415 12.4 -0.367 1.09 1.12 0.345 -2.26 0.442 22.6 16.14 1154 -- --
82.26 0.422 12.4 0.126 1.09 1.17 0.0932 -- 0.576 22.6 14.43 1143 -- --
78.57 0.413 12.4 -0.362 1.1 1.11 -- -2.14 0.444 22.6 16.24 1189 -- --
82.28 0.422 12.4 0.124 1.08 1.17 -- -- 0.577 22.6 14.2 1143 -- --
132.42 0.536 12.4 -0.379 -- 1.84 -- -1.8 0.383 -- 16.2 850 -- --
103.55 0.477 12.3 0.475 1.22 -- 0.115 -- 0.781 22.8 -- -- -- --
103.6 0.477 12.3 0.47 1.22 -- -- -- 0.78 22.8 -- -- -- --
135.14 0.541 12.4 -0.0321 -- 1.94 -- -- 0.481 -- 14.68 839 -- --
82.65 0.423 12.4 -- 1.08 1.22 -- -- 0.558 22.6 12.52 1141 -- --
196.13 0.654 12.3 0.496 -- -- -- -- 0.788 -- -- -- -- --
109.43 0.489 12.3 -- 1.23 -- -- -- 0.728 22.9 -- -- -- --
135.16 0.541 12.4 -- -- 1.93 -- -- 0.484 -- 14.8 835 -- --
202.6 0.664 12.3 -- -- -- -- -- 0.733 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 63.67 temperature 10.0 270 > th dose dependent rect. 13 17
4 64.94 temperature 20.0 270 > th dose independent rect. 12 19
7 65.41 temperature 20.0 90 > th dose independent rect. 3 16
8 65.53 temperature 10.0 270 > th dose dependent rect. 23 8
11 65.71 temperature 20.0 270 > th dose independent rect. 24 7
22 66.56 temperature 20.0 270 > th dose independent rect. 1 17
48 68.52 humidity 60.0 270 > th dose dependent rect. 23 8
59 68.72 precipitation 0.1 270 < th dose independent rect. 13 17
60 68.72 precipitation 0.1 270 < th dose dependent rect. 13 17
66 68.88 wind 9.0 270 < th dose independent rect. 6 7
67 68.91 precipitation 0.1 270 < th dose independent rect. 6 7
69 68.91 precipitation 0.1 270 < th dose dependent rect. 6 7
70 68.92 temperature 10.0 270 > th dose independent rect. 6 7
71 68.92 atmosphere 995.0 270 > th dose independent rect. 6 7
72 68.92 atmosphere 1015.0 270 < th dose independent rect. 6 7
84 69.24 atmosphere 995.0 270 > th dose independent rect. 13 17
86 69.28 wind 9.0 270 < th dose independent rect. 13 17
92 69.57 wind 1.0 270 > th dose independent rect. 6 7
97 69.80 humidity 80.0 270 > th dose independent rect. 24 7
98 69.80 wind 1.0 270 > th dose independent rect. 19 17
110 70.21 precipitation 0.1 270 < th dose independent rect. 12 7
111 70.21 precipitation 0.1 270 < th dose dependent rect. 12 7
112 70.22 wind 1.0 270 > th dose independent rect. 18 19
118 70.33 radiation 1.0 270 < th dose dependent rect. 8 17
120 70.34 temperature 20.0 270 > th dose independent rect. 12 7
125 70.42 temperature 15.0 10 > th dose dependent rect. 14 19
128 70.45 radiation 1.0 270 > th dose independent rect. 6 7
129 70.46 humidity 50.0 270 > th dose independent rect. 6 7
132 70.46 radiation 20.0 270 < th dose dependent rect. 17 9
135 70.50 atmosphere 1010.0 270 < th dose independent rect. 11 8
140 70.55 radiation 1.0 270 < th dose dependent rect. 15 10
141 70.55 radiation 1.0 270 < th dose dependent rect. 5 21
142 70.56 humidity 50.0 270 > th dose independent rect. 17 9
153 70.70 radiation 1.0 270 < th dose independent rect. 8 17
154 70.71 wind 9.0 270 < th dose independent rect. 19 17
162 70.76 radiation 40.0 90 < th dose independent rect. 3 16
163 70.76 temperature 10.0 270 > th dose independent rect. 19 17
164 70.76 atmosphere 995.0 270 > th dose independent rect. 19 17
181 70.87 radiation 1.0 270 > th dose independent rect. 13 17
190 70.92 radiation 1.0 270 < th dose independent rect. 15 10
191 70.93 atmosphere 995.0 270 > th dose independent rect. 12 7
193 70.95 radiation 1.0 270 < th dose independent rect. 17 8
198 71.00 precipitation 0.1 270 < th dose independent rect. 2 15
199 71.00 temperature 20.0 10 > th dose independent rect. 3 17
200 71.00 precipitation 0.1 270 < th dose dependent rect. 2 15
201 71.01 radiation 1.0 270 > th dose independent rect. 13 6
216 71.04 temperature 10.0 10 > th dose dependent rect. 15 17
227 71.11 wind 9.0 270 < th dose independent rect. 12 7
254 71.25 temperature 20.0 270 > th dose independent rect. 13 5
259 71.30 temperature 10.0 270 > th dose independent rect. 17 9
260 71.30 radiation 20.0 270 < th dose independent rect. 17 9
264 71.30 atmosphere 1015.0 270 < th dose independent rect. 2 15
266 71.30 radiation 1.0 270 < th dose dependent sin 16 NA
272 71.34 wind 9.0 270 < th dose independent rect. 17 9
273 71.35 precipitation 0.1 270 < th dose independent rect. 13 5
275 71.35 precipitation 0.1 270 < th dose dependent rect. 13 5
277 71.37 humidity 50.0 270 > th dose independent rect. 19 16
278 71.37 radiation 20.0 90 < th dose independent rect. 3 16
284 71.43 precipitation 0.1 270 < th dose independent rect. 19 17
287 71.43 precipitation 0.1 270 < th dose dependent rect. 19 17
300 71.53 radiation 30.0 270 < th dose dependent rect. 24 8
311 71.62 radiation 10.0 270 < th dose independent rect. 24 8
320 71.71 radiation 1.0 270 > th dose independent rect. 4 9
342 71.74 wind 9.0 270 < th dose independent rect. 18 19
350 71.77 atmosphere 995.0 270 > th dose independent rect. 13 5
357 71.81 wind 9.0 270 < th dose independent rect. 2 15
358 71.82 atmosphere 995.0 270 > th dose independent rect. 2 15
359 71.83 temperature 10.0 270 > th dose independent rect. 13 5
361 71.83 atmosphere 1010.0 270 < th dose independent rect. 13 5
364 71.83 temperature 10.0 270 > th dose independent rect. 18 19
365 71.84 wind 1.0 270 > th dose independent rect. 18 8
380 71.88 radiation 1.0 90 < th dose dependent rect. 19 8
382 71.89 wind 9.0 90 < th dose independent rect. 19 8
383 71.89 temperature 10.0 90 > th dose independent rect. 19 8
384 71.89 temperature 30.0 90 < th dose independent rect. 19 8
385 71.89 humidity 50.0 90 > th dose independent rect. 19 8
387 71.89 atmosphere 995.0 90 > th dose independent rect. 19 8
388 71.89 radiation 1.0 90 < th dose independent rect. 19 8
431 72.01 temperature 10.0 270 > th dose dependent rect. 12 7
433 72.03 radiation 1.0 270 > th dose independent sin 16 NA
435 72.04 atmosphere 995.0 270 > th dose independent rect. 18 19
436 72.06 wind 9.0 270 < th dose independent rect. 13 5
447 72.14 precipitation 0.1 270 < th dose independent rect. 24 7
449 72.14 precipitation 0.1 270 < th dose dependent rect. 24 7
453 72.17 radiation 40.0 90 < th dose dependent rect. 3 16
455 72.19 wind 1.0 270 > th dose independent rect. 12 7
461 72.22 wind 9.0 270 < th dose dependent rect. 24 7
470 72.27 atmosphere 1015.0 270 < th dose independent rect. 13 17
475 72.30 atmosphere 1015.0 270 < th dose independent rect. 24 7
479 72.31 wind 9.0 270 < th dose independent rect. 24 7
481 72.31 temperature 30.0 270 < th dose independent rect. 24 7
482 72.31 humidity 50.0 270 > th dose independent rect. 24 7
484 72.31 atmosphere 995.0 270 > th dose independent rect. 24 7
487 72.31 temperature 10.0 270 > th dose independent rect. 7 17
492 72.36 radiation 1.0 270 < th dose independent sin 16 NA
500 72.41 precipitation 0.1 90 < th dose independent rect. 19 8
501 72.41 precipitation 0.1 90 < th dose dependent rect. 19 8
508 72.43 radiation 40.0 270 < th dose independent rect. 13 17
512 72.48 precipitation 0.1 270 < th dose independent rect. 18 19
513 72.48 precipitation 0.1 270 < th dose dependent rect. 18 19
524 72.51 wind 9.0 270 < th dose independent rect. 7 17
543 72.57 humidity 50.0 270 > th dose independent rect. 7 17
562 72.65 precipitation 0.1 270 < th dose independent rect. 17 9
563 72.65 precipitation 0.1 270 < th dose dependent rect. 17 9
613 72.82 wind 1.0 270 > th dose independent rect. 7 17
657 72.93 temperature 10.0 270 > th dose dependent rect. 1 17
674 73.00 atmosphere 995.0 270 > th dose independent rect. 17 9
677 73.03 wind 1.0 270 > th dose independent rect. 13 5
693 73.12 humidity 50.0 270 > th dose independent rect. 18 19
719 73.22 temperature 10.0 270 > th dose dependent rect. 13 5
748 73.39 precipitation 0.1 270 < th dose independent rect. 7 17
749 73.39 precipitation 0.1 270 < th dose dependent rect. 7 17
757 73.46 atmosphere 995.0 270 > th dose dependent rect. 13 5
776 73.53 radiation 40.0 90 < th dose independent rect. 13 6
792 73.62 radiation 40.0 270 < th dose independent rect. 14 3
826 73.80 wind 1.0 270 > th dose independent rect. 14 3
852 73.87 radiation 40.0 10 < th dose dependent rect. 14 19
912 74.15 atmosphere 995.0 270 > th dose dependent rect. 12 7