Os03g0855600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0855600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15.98 | 0.188 | 12.2 | 0.754 | 0.458 | -0.257 | -0.0575 | 2.35 | 0.0636 | 0.597 | 5.668 | 7352 | -- | -- |
| 20.7 | 0.212 | 12.3 | 0.295 | 0.479 | -0.462 | 0.013 | -- | -0.0362 | 0.68 | 10.92 | 7333 | -- | -- |
| 15.99 | 0.186 | 12.2 | 0.755 | 0.458 | -0.257 | -- | 2.35 | 0.0636 | 0.593 | 5.719 | 7374 | -- | -- |
| 20.57 | 0.211 | 12.3 | 0.246 | 0.466 | -0.43 | -- | -- | -0.0756 | 0.631 | -13.55 | 7363 | -- | -- |
| 25.05 | 0.234 | 12.3 | 0.439 | -- | -0.815 | -- | 1.84 | -0.00908 | -- | 5.719 | 7374 | -- | -- |
| 23.64 | 0.228 | 12.3 | 0.0254 | 0.456 | -- | -0.0472 | -- | -0.191 | 0.592 | -- | -- | -- | -- |
| 23.65 | 0.228 | 12.3 | 0.0272 | 0.456 | -- | -- | -- | -0.191 | 0.592 | -- | -- | -- | -- |
| 27.93 | 0.247 | 12.3 | 0.185 | -- | -0.779 | -- | -- | -0.0791 | -- | 8.871 | 6030 | -- | -- |
| 21.7 | 0.217 | 12.3 | -- | 0.467 | -0.288 | -- | -- | -0.133 | 0.644 | -5.927 | 7298 | -- | -- |
| 36.7 | 0.283 | 12.3 | 0.0432 | -- | -- | -- | -- | -0.183 | -- | -- | -- | -- | -- |
| 23.67 | 0.228 | 12.3 | -- | 0.457 | -- | -- | -- | -0.194 | 0.595 | -- | -- | -- | -- |
| 28.78 | 0.251 | 12.3 | -- | -- | -0.721 | -- | -- | -0.106 | -- | 8.871 | 6030 | -- | -- |
| 36.75 | 0.283 | 12.3 | -- | -- | -- | -- | -- | -0.188 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 14.39 | wind | 3 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 4 | 15.17 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 14 | 15.19 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 15 | 15.23 | humidity | 80 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 19 | 15.30 | wind | 3 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 20 | 15.31 | humidity | 70 | 43200 | < th | dose independent | rect. | 18 | 17 |
| 22 | 15.32 | humidity | 70 | 43200 | > th | dose independent | rect. | 18 | 5 |
| 23 | 15.33 | humidity | 70 | 43200 | > th | dose independent | rect. | 18 | 16 |
| 24 | 15.33 | humidity | 80 | 43200 | < th | dose dependent | rect. | 18 | 5 |
| 26 | 15.34 | humidity | 70 | 43200 | < th | dose independent | rect. | 23 | 12 |
| 33 | 15.35 | humidity | 80 | 43200 | < th | dose dependent | rect. | 17 | 19 |
| 46 | 15.38 | wind | 1 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 61 | 15.40 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 80 | 15.44 | wind | 3 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 86 | 15.44 | humidity | 70 | 43200 | < th | dose dependent | rect. | 21 | 18 |
| 93 | 15.45 | humidity | 70 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 104 | 15.46 | wind | 1 | 43200 | < th | dose dependent | rect. | 8 | 18 |
| 122 | 15.47 | humidity | 70 | 43200 | < th | dose dependent | sin | 6 | NA |
| 146 | 15.48 | humidity | 80 | 43200 | < th | dose dependent | rect. | 23 | 13 |
| 161 | 15.49 | wind | 5 | 14400 | < th | dose dependent | rect. | 11 | 3 |
| 163 | 15.49 | humidity | 80 | 43200 | < th | dose dependent | rect. | 2 | 10 |
| 172 | 15.49 | humidity | 80 | 43200 | < th | dose dependent | rect. | 8 | 22 |
| 177 | 15.50 | humidity | 70 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 178 | 15.50 | wind | 3 | 14400 | > th | dose independent | rect. | 11 | 3 |
| 181 | 15.50 | temperature | 10 | 720 | > th | dose dependent | sin | 6 | NA |
| 183 | 15.50 | humidity | 80 | 43200 | < th | dose dependent | no | NA | NA |
| 190 | 15.50 | wind | 1 | 43200 | < th | dose dependent | rect. | 10 | 16 |
| 196 | 15.50 | humidity | 80 | 43200 | < th | dose dependent | rect. | 8 | 20 |
| 199 | 15.50 | humidity | 80 | 43200 | < th | dose dependent | rect. | 4 | 22 |
| 207 | 15.50 | humidity | 80 | 43200 | < th | dose dependent | rect. | 1 | 23 |
| 218 | 15.51 | humidity | 70 | 43200 | > th | dose independent | rect. | 1 | 10 |
| 228 | 15.51 | humidity | 80 | 43200 | < th | dose dependent | sin | 15 | NA |
| 257 | 15.51 | humidity | 80 | 43200 | < th | dose dependent | rect. | 22 | 23 |
| 301 | 15.53 | wind | 3 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 355 | 15.54 | humidity | 70 | 43200 | < th | dose independent | sin | 9 | NA |
| 362 | 15.54 | humidity | 80 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 453 | 15.56 | humidity | 70 | 43200 | < th | dose dependent | sin | 10 | NA |
| 506 | 15.57 | humidity | 60 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 546 | 15.58 | humidity | 80 | 43200 | < th | dose dependent | rect. | 8 | 3 |
| 579 | 15.59 | humidity | 70 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 631 | 15.60 | temperature | 25 | 720 | < th | dose dependent | sin | 6 | NA |
| 680 | 15.61 | wind | 5 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 681 | 15.61 | humidity | 50 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 786 | 15.63 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 16 |
| 853 | 15.65 | wind | 3 | 14400 | < th | dose independent | rect. | 11 | 3 |
| 910 | 15.66 | wind | 1 | 14400 | > th | dose dependent | rect. | 11 | 4 |
| 933 | 15.67 | humidity | 70 | 43200 | > th | dose independent | sin | 9 | NA |
| 934 | 15.67 | humidity | 70 | 43200 | < th | dose independent | no | NA | NA |
| 972 | 15.68 | humidity | 70 | 43200 | < th | dose independent | sin | 15 | NA |
| 990 | 15.68 | humidity | 70 | 43200 | < th | dose independent | rect. | 10 | 23 |
| 996 | 15.68 | humidity | 70 | 43200 | < th | dose dependent | rect. | 10 | 5 |