Os03g0854500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Heat shock transcription factor 31 (Fragment).
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Os03g0854500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Heat shock transcription factor 31 (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 14.84 | 0.181 | 11.7 | 1.41 | 0.257 | -1.02 | -0.0371 | 1.13 | 0.253 | 22.4 | 19.6 | 91 | -- | -- |
| 15.64 | 0.186 | 11.7 | 1.21 | 0.191 | -1.08 | -0.249 | -- | 0.198 | 23.6 | 16.91 | 56 | -- | -- |
| 14.84 | 0.179 | 11.7 | 1.41 | 0.257 | -1.02 | -- | 1.16 | 0.254 | 22.4 | 19.6 | 91 | -- | -- |
| 15.78 | 0.185 | 11.7 | 1.23 | 0.229 | -1.08 | -- | -- | 0.201 | 22.8 | 16.96 | 54 | -- | -- |
| 17.03 | 0.193 | 11.7 | 1.4 | -- | -1.16 | -- | 1 | 0.268 | -- | 19.44 | 56 | -- | -- |
| 29.84 | 0.256 | 11.7 | 0.988 | 0.504 | -- | -0.156 | -- | 0.0293 | 1.24 | -- | -- | -- | -- |
| 29.94 | 0.256 | 11.7 | 0.993 | 0.504 | -- | -- | -- | 0.0302 | 1.24 | -- | -- | -- | -- |
| 17.75 | 0.197 | 11.7 | 1.25 | -- | -1.21 | -- | -- | 0.224 | -- | 17.4 | 18 | -- | -- |
| 51.08 | 0.335 | 11.7 | -- | 0.332 | -0.539 | -- | -- | -0.000819 | 0.665 | 20.6 | 124 | -- | -- |
| 45.64 | 0.316 | 11.7 | 1.01 | -- | -- | -- | -- | 0.0405 | -- | -- | -- | -- | -- |
| 55.92 | 0.35 | 11.7 | -- | 0.521 | -- | -- | -- | -0.0804 | 1.32 | -- | -- | -- | -- |
| 56.03 | 0.35 | 11.7 | -- | -- | -0.837 | -- | -- | 0.0428 | -- | 20.41 | 6 | -- | -- |
| 72.69 | 0.398 | 11.7 | -- | -- | -- | -- | -- | -0.0719 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 14.71 | temperature | 20 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 3 | 14.86 | temperature | 20 | 90 | > th | dose dependent | no | NA | NA |
| 4 | 14.88 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 5 | 14.94 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 7 | 15.05 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 8 | 15.08 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 11 | 15.13 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 14 | 15.20 | temperature | 20 | 90 | > th | dose dependent | rect. | 3 | 23 |
| 15 | 15.22 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 26 | 15.35 | temperature | 20 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 31 | 15.42 | temperature | 20 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 33 | 15.42 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 42 | 15.58 | temperature | 20 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 45 | 15.61 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 21 |
| 53 | 15.66 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 5 |
| 55 | 15.67 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 4 |
| 60 | 15.69 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 72 | 15.72 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 83 | 15.76 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 9 |
| 84 | 15.77 | temperature | 20 | 1440 | > th | dose dependent | sin | 17 | NA |
| 87 | 15.77 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 88 | 15.77 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 98 | 15.80 | temperature | 20 | 1440 | > th | dose dependent | rect. | 7 | 17 |
| 108 | 15.82 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 15 |
| 111 | 15.82 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 20 |
| 140 | 15.84 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 13 |
| 174 | 15.85 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 22 |
| 177 | 15.85 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 196 | 15.86 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 197 | 15.87 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 198 | 15.87 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 207 | 15.88 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 232 | 15.89 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 233 | 15.89 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 234 | 15.89 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 336 | 15.99 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 352 | 16.02 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 9 |
| 431 | 16.14 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 443 | 16.16 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 467 | 16.20 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 4 |
| 555 | 16.32 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 556 | 16.32 | wind | 3 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 691 | 16.43 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 769 | 16.47 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 10 |
| 905 | 16.52 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 7 |