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Os03g0854200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Exoribonuclease domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9 (0.0267) R2 : 0.729
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -2.41 (0.069) R2dE : 0.726 R2E : 0.727
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0695 (0.0563) R2dN8 : 0.00119 R2N8 : 0.00283
σ : 0.502
deviance : 116.05
__
_____
C
peak time of C : --
E
wheather : radiation
threshold : 0.6299
memory length : 407
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 2.4
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
106.6 0.485 9 0.0284 1.2 -1.95 -0.674 -1.3 -0.0698 15.2 0.5013 312 20.8 --
108.63 0.485 9.01 0.0428 1.19 -1.87 -0.219 -- -0.0719 15.1 0.6111 316 21.2 --
107.66 0.483 9.01 0.0309 1.22 -1.87 -- -0.786 -0.0715 15.2 0.5855 312 21 --
108.72 0.486 9.01 0.0463 1.22 -1.81 -- -- -0.0707 15.2 0.6264 311 21.1 --
118.53 0.507 9.08 0.149 -- -2.43 -- -0.299 -0.121 -- 0.6364 371 1.56 --
147.37 0.569 9.03 0.178 2.27 -- 0.458 -- -0.0749 16.3 -- -- -- --
147.94 0.57 9.03 0.182 2.27 -- -- -- -0.0724 16.3 -- -- -- --
117.09 0.504 9.05 0.111 -- -2.41 -- -- -0.125 -- 1.331 356 1.65 --
108.77 0.486 9.01 -- 1.21 -1.82 -- -- -0.0756 15.2 0.6201 311 21.1 --
425.85 0.964 9.02 0.0915 -- -- -- -- -0.133 -- -- -- -- --
148.81 0.571 9.04 -- 2.27 -- -- -- -0.0927 16.3 -- -- -- --
116.05 0.502 9 -- -- -2.41 -- -- -0.0695 -- 0.6299 407 2.4 --
426.07 0.963 9.02 -- -- -- -- -- -0.143 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 101.96 wind 5.0 270 < th dose independent rect. 3 2
2 102.77 wind 5.0 90 < th dose independent rect. 3 5
3 103.04 temperature 10.0 90 > th dose dependent rect. 8 19
5 103.96 wind 9.0 270 < th dose independent rect. 5 22
7 104.07 temperature 10.0 270 > th dose dependent rect. 6 6
8 104.12 precipitation 0.1 270 < th dose independent rect. 3 2
9 104.12 precipitation 0.1 270 < th dose dependent rect. 3 2
10 104.16 temperature 10.0 10 > th dose dependent rect. 8 20
11 104.27 wind 9.0 90 < th dose independent rect. 8 19
12 104.42 temperature 30.0 270 < th dose dependent rect. 3 2
13 104.45 precipitation 0.1 90 < th dose independent rect. 3 5
14 104.45 precipitation 0.1 90 < th dose dependent rect. 3 5
15 104.48 temperature 10.0 90 > th dose dependent rect. 8 6
19 104.91 radiation 1.0 270 < th dose dependent rect. 3 2
21 104.98 temperature 10.0 270 > th dose independent rect. 3 2
23 104.98 temperature 30.0 270 < th dose independent rect. 3 2
24 104.98 humidity 50.0 270 > th dose independent rect. 3 2
27 104.98 atmosphere 995.0 270 > th dose independent rect. 3 2
28 104.98 atmosphere 1010.0 270 < th dose independent rect. 3 2
30 104.98 radiation 20.0 270 < th dose independent rect. 3 2
33 104.98 temperature 10.0 270 > th dose independent rect. 5 22
34 105.04 radiation 40.0 270 < th dose dependent rect. 3 2
37 105.08 temperature 10.0 90 > th dose independent rect. 3 5
39 105.08 temperature 30.0 90 < th dose independent rect. 3 5
40 105.08 humidity 50.0 90 > th dose independent rect. 3 5
42 105.08 atmosphere 995.0 90 > th dose independent rect. 3 5
43 105.08 atmosphere 1015.0 90 < th dose independent rect. 3 5
44 105.08 temperature 10.0 90 > th dose independent rect. 8 19
45 105.10 precipitation 0.1 90 < th dose independent rect. 8 19
46 105.10 precipitation 0.1 90 < th dose dependent rect. 8 19
48 105.13 radiation 1.0 270 < th dose dependent rect. 3 9
52 105.24 temperature 10.0 270 > th dose dependent rect. 8 2
54 105.28 radiation 1.0 270 < th dose independent rect. 3 2
56 105.35 radiation 40.0 90 < th dose independent rect. 3 5
58 105.37 temperature 10.0 270 > th dose dependent rect. 7 4
63 105.61 wind 9.0 270 < th dose dependent rect. 3 2
64 105.70 temperature 10.0 10 > th dose dependent rect. 8 7
72 106.16 radiation 1.0 270 < th dose dependent rect. 3 14
79 106.39 wind 1.0 270 > th dose independent rect. 3 2
80 106.40 wind 9.0 270 < th dose independent rect. 6 20
84 106.46 wind 9.0 90 < th dose dependent rect. 3 5
87 106.54 wind 5.0 270 < th dose independent rect. 1 6
95 106.88 precipitation 0.1 270 < th dose independent rect. 5 22
97 106.88 precipitation 0.1 270 < th dose dependent rect. 5 22
116 107.25 temperature 10.0 270 > th dose independent rect. 6 20
122 107.40 radiation 1.0 270 < th dose independent rect. 3 9
127 107.47 radiation 40.0 270 < th dose dependent rect. 2 4
129 107.55 temperature 30.0 90 < th dose dependent rect. 3 5
137 107.63 precipitation 0.1 270 < th dose independent rect. 6 20
138 107.63 precipitation 0.1 270 < th dose dependent rect. 6 20
146 107.80 wind 9.0 10 < th dose independent rect. 8 20
148 107.81 atmosphere 995.0 90 > th dose independent rect. 8 19
151 107.98 temperature 15.0 90 > th dose independent rect. 8 6
158 108.13 radiation 1.0 270 < th dose independent rect. 2 15
184 108.33 atmosphere 995.0 90 > th dose dependent rect. 3 5
186 108.34 wind 5.0 10 < th dose independent rect. 4 4
191 108.39 humidity 50.0 270 > th dose dependent rect. 3 2
200 108.47 precipitation 0.1 10 < th dose independent rect. 4 4
202 108.47 precipitation 0.1 10 < th dose dependent rect. 4 4
204 108.52 wind 1.0 270 > th dose independent rect. 2 4
209 108.54 humidity 90.0 90 < th dose independent rect. 8 6
218 108.66 temperature 10.0 10 > th dose independent rect. 4 4
220 108.66 temperature 30.0 10 < th dose independent rect. 4 4
221 108.66 humidity 50.0 10 > th dose independent rect. 4 4
223 108.66 atmosphere 995.0 10 > th dose independent rect. 4 4
224 108.66 atmosphere 1015.0 10 < th dose independent rect. 4 4
225 108.66 temperature 10.0 10 > th dose independent rect. 8 20
237 108.99 temperature 15.0 270 > th dose independent rect. 6 7
260 109.14 radiation 1.0 270 > th dose independent sin 3 NA
274 109.36 precipitation 0.1 270 < th dose independent rect. 1 6
277 109.36 precipitation 0.1 270 < th dose dependent rect. 1 6
292 109.54 humidity 90.0 10 < th dose independent rect. 8 7
295 109.57 radiation 1.0 270 > th dose independent rect. 6 7
299 109.62 wind 9.0 90 < th dose independent rect. 8 6
302 109.65 wind 9.0 90 < th dose dependent rect. 8 19
306 109.69 wind 9.0 270 < th dose dependent rect. 6 7
311 109.70 temperature 10.0 270 > th dose dependent rect. 20 15
312 109.73 radiation 40.0 10 < th dose independent rect. 4 4
329 109.76 radiation 1.0 270 < th dose dependent sin 3 NA
332 109.78 atmosphere 995.0 270 > th dose dependent rect. 3 2
336 109.82 precipitation 0.1 90 < th dose independent rect. 8 6
337 109.82 precipitation 0.1 90 < th dose dependent rect. 8 6
338 109.84 wind 7.0 270 < th dose independent rect. 6 7
356 109.97 temperature 10.0 270 > th dose independent rect. 1 6
358 109.97 temperature 30.0 270 < th dose independent rect. 1 6
359 109.97 humidity 50.0 270 > th dose independent rect. 1 6
361 109.97 atmosphere 995.0 270 > th dose independent rect. 1 6
362 109.97 atmosphere 1015.0 270 < th dose independent rect. 1 6
363 109.97 radiation 40.0 270 < th dose independent rect. 1 6
369 110.06 radiation 40.0 90 < th dose independent rect. 14 18
372 110.07 wind 9.0 270 < th dose dependent rect. 7 4
374 110.08 radiation 1.0 270 < th dose independent sin 3 NA
385 110.16 temperature 30.0 10 < th dose dependent rect. 4 4
392 110.20 wind 9.0 10 < th dose independent rect. 8 7
410 110.31 atmosphere 995.0 90 > th dose independent rect. 8 6
412 110.31 atmosphere 1015.0 90 < th dose independent rect. 8 6
413 110.31 temperature 10.0 90 > th dose independent rect. 14 18
420 110.36 humidity 50.0 90 > th dose independent rect. 8 6
443 110.50 temperature 20.0 10 > th dose independent rect. 8 7
452 110.54 radiation 1.0 90 > th dose independent rect. 8 6
473 110.57 atmosphere 995.0 10 > th dose independent rect. 8 20
476 110.62 radiation 1.0 10 > th dose independent rect. 8 7
487 110.68 temperature 10.0 10 > th dose independent rect. 8 7
489 110.68 atmosphere 995.0 10 > th dose independent rect. 8 7
490 110.68 atmosphere 1015.0 10 < th dose independent rect. 8 7
491 110.68 precipitation 0.1 10 < th dose independent rect. 8 7
492 110.68 temperature 10.0 10 > th dose independent rect. 15 17
495 110.68 precipitation 0.1 10 < th dose dependent rect. 8 7
498 110.70 wind 9.0 90 < th dose independent rect. 14 18
502 110.72 humidity 50.0 270 > th dose independent rect. 6 7
529 110.83 wind 9.0 10 < th dose dependent rect. 4 4
554 110.98 wind 1.0 30 > th dose independent rect. 8 7
601 111.20 precipitation 0.1 270 < th dose independent rect. 6 7
602 111.20 precipitation 0.1 270 < th dose dependent rect. 6 7
604 111.22 temperature 10.0 1440 > th dose independent rect. 9 7
607 111.22 temperature 10.0 1440 > th dose independent rect. 16 17
610 111.22 wind 9.0 270 < th dose dependent rect. 8 2
615 111.25 radiation 1.0 270 > th dose independent rect. 8 2
624 111.30 wind 9.0 10 < th dose independent rect. 15 17
625 111.31 wind 9.0 270 < th dose independent rect. 17 9
626 111.31 humidity 50.0 270 > th dose dependent rect. 2 4
633 111.34 wind 9.0 270 < th dose dependent rect. 6 20
647 111.45 atmosphere 995.0 270 > th dose independent rect. 6 7
648 111.45 atmosphere 1015.0 270 < th dose independent rect. 6 7
650 111.45 precipitation 0.1 10 < th dose independent rect. 15 17
652 111.45 precipitation 0.1 10 < th dose dependent rect. 15 17
669 111.52 radiation 1.0 270 > th dose independent rect. 7 4
683 111.61 temperature 10.0 270 > th dose independent rect. 17 9
684 111.61 radiation 20.0 270 < th dose independent rect. 17 9
687 111.61 temperature 10.0 270 > th dose independent rect. 2 15
688 111.61 atmosphere 1015.0 270 < th dose independent rect. 2 15
689 111.61 atmosphere 1015.0 90 < th dose independent rect. 8 19
697 111.67 atmosphere 995.0 90 > th dose independent rect. 14 18
706 111.75 precipitation 0.1 270 < th dose independent rect. 2 15
707 111.75 precipitation 0.1 270 < th dose dependent rect. 2 15
710 111.78 precipitation 0.1 90 < th dose independent rect. 14 18
712 111.78 precipitation 0.1 90 < th dose dependent rect. 14 18
721 111.85 precipitation 0.1 270 < th dose independent rect. 17 9
723 111.85 precipitation 0.1 270 < th dose dependent rect. 17 9
759 112.03 wind 5.0 270 < th dose independent rect. 8 2
760 112.04 atmosphere 995.0 10 > th dose independent rect. 15 17
787 112.19 radiation 1.0 270 > th dose independent rect. 17 21
792 112.22 radiation 40.0 270 < th dose dependent rect. 17 9
805 112.28 temperature 10.0 90 > th dose dependent rect. 3 5
807 112.30 atmosphere 1015.0 90 < th dose independent rect. 14 18
822 112.37 humidity 50.0 90 > th dose independent rect. 8 19
829 112.42 temperature 15.0 270 > th dose independent rect. 8 2
835 112.44 temperature 10.0 270 > th dose dependent rect. 3 2
847 112.50 wind 9.0 1440 < th dose independent rect. 4 5
848 112.50 temperature 10.0 1440 > th dose independent rect. 4 5
851 112.50 humidity 50.0 1440 > th dose independent rect. 4 5
853 112.50 atmosphere 995.0 1440 > th dose independent rect. 4 5
854 112.50 atmosphere 1015.0 1440 < th dose independent rect. 4 5
855 112.50 temperature 10.0 1440 > th dose independent rect. 9 19
858 112.50 atmosphere 995.0 270 > th dose independent rect. 6 20
903 112.80 atmosphere 1015.0 10 < th dose independent rect. 15 17
935 112.91 temperature 30.0 90 < th dose dependent rect. 3 16
937 112.92 wind 1.0 270 > th dose independent rect. 13 17
943 112.95 wind 9.0 270 < th dose independent rect. 2 15
976 113.11 humidity 50.0 90 > th dose independent rect. 15 17
983 113.19 humidity 90.0 270 < th dose independent rect. 8 2
988 113.23 atmosphere 1005.0 90 > th dose independent rect. 3 5