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Os03g0853900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.62 (0.031) R2 : 0.000848
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0406 (0.0653) R2dN8 : 0.00109 R2N8 : 0.000848
σ : 0.584
deviance : 156.61
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
135.91 0.548 7.62 0.439 0.545 0.544 0.582 0.627 0.0159 22.8 20.02 11 -- --
136.9 0.545 7.62 0.435 0.538 0.544 0.128 -- 0.011 22.9 20.01 10 -- --
136.45 0.544 7.63 0.416 0.599 0.587 -- 0.378 0.00958 23 19.72 19 -- --
136.36 0.544 7.62 0.485 0.557 0.551 -- -- 0.0263 23 19.7 9 -- --
144.96 0.564 7.61 0.471 -- 0.283 -- 0.879 0.0157 -- 39.72 8 -- --
147.65 0.57 7.62 0.503 0.204 -- 0.376 -- 0.0166 19.3 -- -- -- --
147.96 0.57 7.62 0.494 0.205 -- -- -- 0.0166 19.9 -- -- -- --
145.6 0.562 7.61 0.471 -- 0.335 -- -- 0.00136 -- 30.05 74 -- --
142.03 0.555 7.63 -- 0.645 0.611 -- -- 0.00158 23.1 17.76 11 -- --
150.24 0.573 7.61 0.491 -- -- -- -- 0.0139 -- -- -- -- --
154.38 0.581 7.63 -- 0.202 -- -- -- -0.0383 20.1 -- -- -- --
151.55 0.573 7.63 -- -- 0.348 -- -- -0.0576 -- 30.25 74 -- --
156.61 0.584 7.62 -- -- -- -- -- -0.0406 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 121.24 temperature 10.0 270 > th dose dependent rect. 6 7
8 122.27 temperature 10.0 90 > th dose dependent rect. 8 19
9 122.53 temperature 15.0 90 > th dose dependent rect. 19 20
10 122.63 temperature 10.0 10 > th dose dependent rect. 9 18
13 122.95 temperature 25.0 270 < th dose independent rect. 1 8
23 123.72 temperature 10.0 270 > th dose dependent rect. 19 17
43 124.36 temperature 25.0 270 < th dose independent rect. 3 2
45 124.39 temperature 15.0 10 > th dose dependent rect. 9 6
81 125.05 precipitation 0.1 270 < th dose independent rect. 14 16
82 125.05 temperature 10.0 90 > th dose dependent rect. 19 8
83 125.05 precipitation 0.1 270 < th dose dependent rect. 14 16
87 125.13 wind 7.0 270 < th dose independent rect. 6 8
89 125.14 wind 9.0 270 < th dose dependent rect. 6 8
92 125.21 radiation 40.0 90 < th dose independent rect. 3 16
103 125.53 precipitation 0.1 270 < th dose independent rect. 2 15
104 125.53 precipitation 0.1 270 < th dose dependent rect. 2 15
109 125.60 temperature 20.0 90 > th dose independent rect. 19 8
117 125.71 radiation 40.0 10 < th dose dependent rect. 5 14
119 125.72 atmosphere 995.0 270 > th dose independent rect. 2 15
127 125.80 atmosphere 995.0 270 > th dose independent rect. 14 16
132 125.90 humidity 50.0 90 > th dose dependent rect. 19 8
133 125.91 temperature 20.0 10 > th dose independent rect. 19 9
146 126.09 humidity 50.0 270 > th dose independent rect. 6 8
171 126.36 temperature 25.0 270 > th dose independent rect. 22 14
178 126.39 temperature 20.0 10 > th dose independent rect. 9 19
185 126.47 radiation 1.0 90 < th dose dependent sin 13 NA
188 126.50 temperature 20.0 90 > th dose independent rect. 8 19
189 126.51 radiation 20.0 10 < th dose independent rect. 5 14
194 126.56 temperature 25.0 270 < th dose independent sin 7 NA
210 126.66 humidity 50.0 270 > th dose dependent rect. 17 9
211 126.68 wind 9.0 270 < th dose independent rect. 17 9
229 126.81 temperature 25.0 270 > th dose independent rect. 19 18
230 126.82 radiation 40.0 270 < th dose dependent rect. 17 9
237 126.85 temperature 15.0 270 > th dose dependent rect. 9 1
240 126.86 temperature 10.0 270 > th dose independent rect. 17 9
241 126.86 radiation 20.0 270 < th dose independent rect. 17 9
244 126.86 temperature 10.0 270 > th dose independent rect. 2 15
245 126.86 atmosphere 1015.0 270 < th dose independent rect. 2 15
250 126.88 humidity 50.0 270 > th dose independent rect. 17 9
257 126.90 precipitation 0.1 270 < th dose independent rect. 6 8
258 126.90 precipitation 0.1 270 < th dose dependent rect. 6 8
263 126.92 radiation 1.0 30 < th dose dependent sin 11 NA
276 127.04 atmosphere 995.0 90 > th dose independent rect. 4 15
280 127.06 temperature 30.0 90 < th dose independent rect. 3 15
283 127.08 temperature 10.0 270 > th dose independent rect. 6 8
284 127.08 atmosphere 995.0 270 > th dose independent rect. 6 8
285 127.08 atmosphere 1015.0 270 < th dose independent rect. 6 8
286 127.08 temperature 10.0 270 > th dose independent rect. 14 16
291 127.10 wind 5.0 270 < th dose independent rect. 2 4
296 127.13 wind 7.0 90 < th dose independent rect. 8 19
299 127.14 radiation 1.0 90 > th dose independent sin 13 NA
300 127.14 wind 9.0 270 < th dose independent rect. 6 21
313 127.25 temperature 10.0 90 > th dose independent rect. 19 9
314 127.25 temperature 30.0 90 < th dose independent rect. 19 9
315 127.25 humidity 50.0 90 > th dose independent rect. 19 9
317 127.25 atmosphere 995.0 90 > th dose independent rect. 19 9
318 127.25 radiation 1.0 90 < th dose independent rect. 19 9
323 127.25 temperature 10.0 90 > th dose independent rect. 4 15
324 127.25 atmosphere 1015.0 90 < th dose independent rect. 4 15
328 127.25 radiation 1.0 90 < th dose dependent rect. 19 9
336 127.28 wind 9.0 90 < th dose independent rect. 19 9
346 127.31 radiation 1.0 10 < th dose dependent rect. 19 11
353 127.39 precipitation 0.1 270 < th dose independent rect. 2 4
355 127.39 precipitation 0.1 270 < th dose dependent rect. 2 4
364 127.46 radiation 1.0 30 > th dose independent sin 11 NA
393 127.52 wind 7.0 90 < th dose dependent rect. 3 5
397 127.53 radiation 1.0 30 < th dose dependent rect. 19 19
403 127.55 wind 7.0 10 < th dose dependent rect. 4 5
407 127.59 wind 9.0 90 < th dose independent rect. 8 7
417 127.65 humidity 50.0 270 > th dose independent rect. 6 20
418 127.66 atmosphere 1000.0 10 > th dose independent rect. 5 14
424 127.67 temperature 15.0 90 > th dose dependent rect. 23 15
433 127.76 humidity 50.0 90 > th dose independent rect. 8 7
437 127.77 radiation 1.0 30 < th dose dependent rect. 19 13
456 127.83 radiation 1.0 90 > th dose independent rect. 15 16
457 127.83 temperature 20.0 270 > th dose independent rect. 6 19
464 127.87 temperature 25.0 270 > th dose independent sin 7 NA
478 127.90 wind 5.0 270 < th dose independent rect. 1 6
481 127.90 wind 9.0 270 < th dose independent rect. 14 16
498 127.99 radiation 1.0 10 < th dose independent rect. 19 11
513 128.05 wind 9.0 270 < th dose dependent rect. 7 18
520 128.09 precipitation 0.1 90 < th dose independent rect. 8 7
523 128.09 precipitation 0.1 90 < th dose dependent rect. 8 7
542 128.14 radiation 40.0 270 < th dose independent rect. 14 16
564 128.19 wind 9.0 10 < th dose independent rect. 9 19
565 128.19 wind 9.0 270 < th dose dependent rect. 3 3
582 128.23 temperature 10.0 90 > th dose independent rect. 8 7
583 128.23 atmosphere 1015.0 90 < th dose independent rect. 8 7
592 128.24 radiation 1.0 270 < th dose independent rect. 11 15
615 128.27 temperature 25.0 270 < th dose independent rect. 1 14
625 128.27 wind 9.0 270 < th dose dependent rect. 6 20
640 128.34 temperature 10.0 270 > th dose independent rect. 2 4
643 128.34 humidity 50.0 270 > th dose independent rect. 2 4
646 128.34 atmosphere 995.0 270 > th dose independent rect. 2 4
647 128.34 atmosphere 1015.0 270 < th dose independent rect. 2 4
648 128.34 radiation 20.0 270 < th dose independent rect. 2 4
655 128.34 temperature 10.0 270 > th dose independent rect. 6 20
661 128.39 precipitation 0.1 270 < th dose independent rect. 1 6
662 128.39 precipitation 0.1 270 < th dose dependent rect. 1 6
663 128.40 radiation 1.0 270 < th dose dependent rect. 11 15
668 128.41 radiation 1.0 270 < th dose dependent rect. 5 21
680 128.48 precipitation 0.1 90 < th dose independent rect. 19 8
684 128.48 precipitation 0.1 90 < th dose dependent rect. 19 8
708 128.52 radiation 30.0 90 < th dose independent rect. 3 6
721 128.55 radiation 1.0 10 < th dose independent rect. 19 19
730 128.57 radiation 1.0 10 < th dose independent sin 11 NA
737 128.58 humidity 50.0 270 > th dose dependent rect. 2 4
765 128.61 wind 9.0 270 < th dose independent rect. 2 15
768 128.62 humidity 90.0 270 > th dose independent rect. 4 1
770 128.62 radiation 40.0 270 < th dose dependent rect. 2 4
777 128.64 radiation 1.0 270 > th dose independent rect. 6 8
778 128.64 precipitation 0.1 270 < th dose independent rect. 17 9
782 128.64 precipitation 0.1 270 < th dose dependent rect. 17 9
798 128.68 humidity 50.0 270 > th dose dependent rect. 3 2
803 128.69 atmosphere 995.0 90 > th dose independent rect. 8 7
905 128.89 radiation 1.0 90 < th dose independent sin 13 NA
929 128.93 temperature 10.0 90 > th dose independent rect. 8 19
931 128.94 radiation 40.0 10 < th dose independent rect. 4 15