Os03g0853800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1301 family protein.
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Os03g0853800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1301 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 33.11 | 0.27 | 10.7 | 1.05 | 1.14 | 0.291 | 0.0701 | 0.143 | 0.135 | 18.4 | 21.07 | 91 | -- | -- |
| 33.18 | 0.268 | 10.7 | 1.05 | 1.14 | 0.29 | 0.0624 | -- | 0.135 | 18.4 | 20.83 | 91 | -- | -- |
| 33.12 | 0.268 | 10.7 | 1.05 | 1.14 | 0.291 | -- | 0.14 | 0.135 | 18.4 | 21.08 | 91 | -- | -- |
| 33.18 | 0.268 | 10.7 | 1.05 | 1.14 | 0.289 | -- | -- | 0.134 | 18.4 | 20.41 | 91 | -- | -- |
| 41.68 | 0.301 | 10.7 | 0.975 | -- | 1.23 | -- | 0.488 | -0.11 | -- | 2.18 | 689 | -- | -- |
| 35.63 | 0.28 | 10.7 | 1.09 | 1.18 | -- | 0.0811 | -- | 0.16 | 17.8 | -- | -- | -- | -- |
| 35.64 | 0.28 | 10.7 | 1.09 | 1.18 | -- | -- | -- | 0.16 | 17.8 | -- | -- | -- | -- |
| 36.12 | 0.28 | 10.7 | 1.02 | -- | 1.46 | -- | -- | 0.0823 | -- | 2.18 | 727 | -- | -- |
| 62.05 | 0.367 | 10.8 | -- | 1.13 | 0.318 | -- | -- | 0.0229 | 18.4 | 20.02 | 91 | -- | -- |
| 107.58 | 0.485 | 10.7 | 1.05 | -- | -- | -- | -- | 0.132 | -- | -- | -- | -- | -- |
| 66.87 | 0.383 | 10.8 | -- | 1.16 | -- | -- | -- | 0.0387 | 17.8 | -- | -- | -- | -- |
| 61.07 | 0.364 | 10.7 | -- | -- | 1.48 | -- | -- | 0.0428 | -- | 0.003406 | 732 | -- | -- |
| 136.77 | 0.546 | 10.7 | -- | -- | -- | -- | -- | 0.0156 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.08 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 5 |
| 2 | 29.20 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 3 | 5 |
| 4 | 29.25 | humidity | 90.0 | 10 | < th | dose independent | rect. | 2 | 7 |
| 6 | 29.45 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 8 | 29.50 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 11 | 29.65 | wind | 5.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 12 | 29.66 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 4 | 5 |
| 17 | 29.74 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 21 |
| 20 | 29.74 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 29 | 29.86 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 32 | 29.89 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 20 |
| 33 | 29.89 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 20 |
| 43 | 29.96 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 23 |
| 46 | 30.00 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 49 | 30.00 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 50 | 30.00 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 5 |
| 51 | 30.00 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 19 |
| 58 | 30.03 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 60 | 30.03 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 70 | 30.11 | radiation | 10.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 73 | 30.11 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 75 | 30.12 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 77 | 30.12 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 78 | 30.12 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 81 | 30.12 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 82 | 30.12 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 87 | 30.12 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 91 | 30.13 | radiation | 30.0 | 90 | < th | dose independent | rect. | 4 | 5 |
| 99 | 30.16 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 132 | 30.24 | temperature | 10.0 | 90 | > th | dose independent | rect. | 8 | 20 |
| 149 | 30.27 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 1 |
| 151 | 30.27 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 159 | 30.28 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 4 | 4 |
| 168 | 30.32 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 169 | 30.32 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 178 | 30.35 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 180 | 30.35 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 181 | 30.35 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 184 | 30.35 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 185 | 30.35 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 187 | 30.35 | radiation | 20.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 190 | 30.35 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 191 | 30.35 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 23 |
| 194 | 30.36 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 199 | 30.37 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 210 | 30.41 | radiation | 1.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 218 | 30.41 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 13 | 18 |
| 231 | 30.45 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 251 | 30.45 | wind | 9.0 | 10 | < th | dose dependent | rect. | 5 | 4 |
| 258 | 30.47 | radiation | 20.0 | 270 | < th | dose independent | rect. | 2 | 6 |
| 315 | 30.52 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 4 | 2 |
| 320 | 30.52 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 15 |
| 326 | 30.53 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 20 |
| 357 | 30.55 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 3 | 15 |
| 358 | 30.56 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 424 | 30.64 | wind | 9.0 | 1440 | < th | dose independent | rect. | 5 | 4 |
| 428 | 30.64 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 453 | 30.66 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 476 | 30.70 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 481 | 30.71 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 515 | 30.77 | radiation | 30.0 | 270 | < th | dose independent | rect. | 12 | 19 |
| 529 | 30.78 | radiation | 20.0 | 270 | < th | dose independent | rect. | 14 | 17 |
| 590 | 30.88 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 12 | 10 |
| 592 | 30.88 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 15 | 18 |
| 594 | 30.88 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 599 | 30.89 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 634 | 30.89 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 650 | 30.91 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 5 | 4 |
| 652 | 30.91 | temperature | 15.0 | 10 | > th | dose independent | rect. | 15 | 18 |
| 656 | 30.91 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 5 |
| 664 | 30.92 | temperature | 15.0 | 90 | > th | dose independent | rect. | 15 | 17 |
| 676 | 30.93 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 15 | 17 |
| 707 | 30.96 | radiation | 1.0 | 10 | > th | dose independent | rect. | 9 | 6 |
| 717 | 30.97 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 6 |
| 753 | 31.02 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 9 | 19 |
| 764 | 31.03 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 9 | 19 |
| 767 | 31.04 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 791 | 31.06 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 7 |
| 798 | 31.06 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 7 |
| 801 | 31.07 | wind | 7.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 802 | 31.07 | radiation | 1.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 810 | 31.07 | temperature | 15.0 | 270 | > th | dose independent | rect. | 11 | 11 |
| 842 | 31.09 | humidity | 50.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 843 | 31.09 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 9 | 1 |
| 854 | 31.09 | temperature | 10.0 | 90 | > th | dose independent | rect. | 8 | 7 |
| 855 | 31.09 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 8 | 7 |
| 862 | 31.09 | wind | 9.0 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 863 | 31.09 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 873 | 31.10 | temperature | 10.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 874 | 31.10 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 875 | 31.10 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 881 | 31.10 | temperature | 10.0 | 270 | > th | dose independent | rect. | 10 | 23 |
| 887 | 31.11 | temperature | 10.0 | 10 | > th | dose independent | rect. | 9 | 6 |
| 889 | 31.11 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 9 | 6 |
| 890 | 31.11 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 9 | 6 |
| 891 | 31.11 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 9 | 6 |
| 892 | 31.11 | wind | 9.0 | 90 | < th | dose independent | rect. | 8 | 7 |
| 900 | 31.11 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 9 | 6 |
| 911 | 31.12 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 19 |
| 918 | 31.13 | wind | 9.0 | 10 | < th | dose independent | rect. | 9 | 6 |
| 922 | 31.13 | radiation | 40.0 | 10 | < th | dose independent | rect. | 12 | 21 |
| 941 | 31.14 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 7 |