Os03g0852800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Phosphoesterase family protein.
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Os03g0852800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Phosphoesterase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 246.43 | 0.738 | 8.58 | -1.51 | 0.966 | 3.09 | 1.3 | 2.79 | -0.845 | 7.36 | 26.05 | 3774 | -- | -- |
| 252.65 | 0.74 | 8.5 | -0.994 | 0.966 | 2.74 | 1.47 | -- | -0.783 | 7.3 | 28.82 | 3777 | -- | -- |
| 250.06 | 0.736 | 8.58 | -1.49 | 0.934 | 3.18 | -- | 2.95 | -0.821 | 7.75 | 26.1 | 3693 | -- | -- |
| 256.97 | 0.747 | 8.5 | -0.982 | 0.96 | 2.71 | -- | -- | -0.781 | 7.86 | 28.4 | 3744 | -- | -- |
| 298.43 | 0.805 | 8.6 | -1.47 | -- | 3.2 | -- | 2.86 | -0.813 | -- | 26.4 | 3619 | -- | -- |
| 380.33 | 0.914 | 8.64 | -2.24 | 1.07 | -- | 0.956 | -- | -1.42 | 8.23 | -- | -- | -- | -- |
| 382.65 | 0.916 | 8.64 | -2.21 | 1.07 | -- | -- | -- | -1.42 | 8.56 | -- | -- | -- | -- |
| 286.26 | 0.788 | 8.55 | -1.42 | -- | 3.17 | -- | -- | -0.885 | -- | 32.05 | 621 | -- | -- |
| 274.49 | 0.772 | 8.45 | -- | 0.961 | 3.26 | -- | -- | -0.532 | 7.79 | 26.7 | 3785 | -- | -- |
| 446.44 | 0.987 | 8.67 | -2.21 | -- | -- | -- | -- | -1.41 | -- | -- | -- | -- | -- |
| 511.7 | 1.06 | 8.58 | -- | 1.06 | -- | -- | -- | -1.17 | 8.71 | -- | -- | -- | -- |
| 322.27 | 0.836 | 8.46 | -- | -- | 3.37 | -- | -- | -0.499 | -- | 26.99 | 3669 | -- | -- |
| 575.14 | 1.12 | 8.61 | -- | -- | -- | -- | -- | -1.16 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 236.33 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 3 |
| 2 | 237.23 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 3 |
| 3 | 237.45 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 5 | 238.90 | temperature | 15 | 4320 | > th | dose dependent | rect. | 23 | 2 |
| 12 | 239.76 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 5 |
| 13 | 239.82 | temperature | 25 | 4320 | < th | dose dependent | rect. | 20 | 7 |
| 14 | 239.83 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 3 |
| 29 | 240.24 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 30 | 240.25 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 3 |
| 68 | 241.22 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 210 | 243.89 | radiation | 10 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 325 | 245.22 | temperature | 25 | 4320 | < th | dose dependent | sin | 13 | NA |
| 393 | 245.98 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 443 | 246.45 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 575 | 247.54 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 579 | 247.57 | temperature | 15 | 4320 | > th | dose dependent | sin | 12 | NA |
| 677 | 248.45 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 705 | 248.69 | radiation | 20 | 4320 | < th | dose independent | rect. | 15 | 15 |
| 765 | 249.12 | radiation | 20 | 4320 | < th | dose independent | rect. | 15 | 8 |
| 843 | 249.63 | temperature | 20 | 4320 | > th | dose independent | sin | 13 | NA |
| 856 | 249.72 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 860 | 249.75 | temperature | 20 | 4320 | < th | dose independent | sin | 13 | NA |