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Os03g0852000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.45 (0.0271) R2 : 0.801
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 2.68 (0.0638) R2dE : 0.771 R2E : 0.781
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.339 (0.0571) R2dN8 : 0.0199 R2N8 : 0.0299
σ : 0.509
deviance : 119.36
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_____
C
peak time of C : --
E
wheather : radiation
threshold : 39.39
memory length : 202
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 1.39
open length of G : 7.91

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
113.05 0.5 8.46 -0.0792 0.483 2.75 -0.164 0.125 0.35 0.243 43.04 249 1.02 8.27
112.9 0.495 8.46 -0.0668 0.486 2.77 -0.146 -- 0.343 0.06 43.84 244 1.08 8.22
112.94 0.495 8.46 -0.0688 0.492 2.77 -- 0.2 0.349 0.0393 44.04 244 1.08 8.23
112.92 0.495 8.46 -0.0671 0.489 2.79 -- -- 0.351 23.9 43.8 241 1.13 8.18
119.74 0.51 8.44 0.0134 -- 2.68 -- 0.446 0.369 -- 40.58 204 1.35 8.02
213.56 0.685 8.37 0.00612 2.66 -- -0.443 -- 0.445 5.99 -- -- -- --
214.04 0.685 8.37 0.00235 2.66 -- -- -- 0.447 5.99 -- -- -- --
119.26 0.509 8.45 -0.0676 -- 2.66 -- -- 0.352 -- 39.29 203 1.37 7.92
113.03 0.495 8.45 -- 0.476 2.78 -- -- 0.362 24 43.87 239 1.17 8.17
580.21 1.13 8.41 0.0803 -- -- -- -- 0.508 -- -- -- -- --
214.04 0.684 8.37 -- 2.66 -- -- -- 0.447 5.99 -- -- -- --
119.36 0.509 8.45 -- -- 2.68 -- -- 0.339 -- 39.39 202 1.39 7.91
580.38 1.12 8.42 -- -- -- -- -- 0.499 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 115.05 radiation 40.0 270 < th dose dependent rect. 1 8
7 118.31 radiation 20.0 270 < th dose independent rect. 1 8
9 119.71 radiation 40.0 90 < th dose dependent rect. 3 8
12 121.01 wind 5.0 270 < th dose independent rect. 1 6
15 121.15 temperature 15.0 270 > th dose independent rect. 20 5
17 121.59 precipitation 0.1 270 < th dose independent rect. 1 6
18 121.59 precipitation 0.1 270 < th dose dependent rect. 1 6
19 121.61 temperature 10.0 270 > th dose dependent rect. 20 5
21 122.11 wind 9.0 270 < th dose dependent rect. 1 6
22 122.27 temperature 15.0 270 > th dose independent rect. 7 18
26 122.61 precipitation 0.1 270 < th dose independent rect. 7 18
27 122.61 precipitation 0.1 270 < th dose dependent rect. 7 18
31 122.95 humidity 70.0 270 > th dose independent rect. 1 6
32 122.96 wind 9.0 270 < th dose independent rect. 7 18
43 123.25 temperature 10.0 270 > th dose independent rect. 1 6
45 123.25 temperature 30.0 270 < th dose independent rect. 1 6
46 123.25 humidity 50.0 270 > th dose independent rect. 1 6
48 123.25 atmosphere 995.0 270 > th dose independent rect. 1 6
49 123.25 atmosphere 1015.0 270 < th dose independent rect. 1 6
73 124.78 radiation 20.0 90 < th dose independent rect. 3 7
76 125.45 wind 9.0 270 < th dose independent rect. 20 5
80 125.54 precipitation 0.1 270 < th dose independent rect. 19 7
81 125.54 precipitation 0.1 270 < th dose dependent rect. 19 7
83 125.55 temperature 30.0 270 < th dose independent rect. 20 5
84 125.55 humidity 50.0 270 > th dose independent rect. 20 5
87 125.55 atmosphere 995.0 270 > th dose independent rect. 20 5
88 125.55 radiation 1.0 270 < th dose independent rect. 20 5
93 125.55 temperature 10.0 270 > th dose independent rect. 1 19
94 125.55 atmosphere 1015.0 270 < th dose independent rect. 1 19
95 125.55 radiation 1.0 270 < th dose dependent rect. 20 5
102 125.81 wind 9.0 90 < th dose dependent rect. 3 6
106 126.07 precipitation 0.1 270 < th dose independent rect. 20 5
107 126.07 precipitation 0.1 270 < th dose dependent rect. 20 5
108 126.17 wind 9.0 270 < th dose independent rect. 19 7
110 126.27 temperature 30.0 270 < th dose independent rect. 19 7
111 126.27 humidity 50.0 270 > th dose independent rect. 19 7
112 126.27 atmosphere 995.0 270 > th dose independent rect. 19 7
113 126.27 radiation 1.0 270 < th dose independent rect. 19 7
118 126.27 temperature 10.0 270 > th dose independent rect. 2 17
119 126.27 atmosphere 1015.0 270 < th dose independent rect. 2 17
120 126.27 radiation 1.0 270 < th dose dependent rect. 19 7
128 126.44 wind 9.0 270 < th dose independent rect. 1 19
140 126.92 humidity 70.0 90 > th dose independent rect. 3 6
141 126.98 humidity 50.0 90 > th dose dependent rect. 3 8
144 127.11 atmosphere 1010.0 90 < th dose independent rect. 3 6
145 127.12 temperature 10.0 270 > th dose dependent rect. 1 7
147 127.20 precipitation 0.1 270 < th dose independent rect. 2 17
148 127.20 precipitation 0.1 270 < th dose dependent rect. 2 17
152 127.32 wind 9.0 270 < th dose independent rect. 2 17
169 127.36 humidity 50.0 270 > th dose dependent rect. 1 7
172 127.51 wind 5.0 90 < th dose independent rect. 3 6
180 127.77 precipitation 0.1 90 < th dose independent rect. 3 6
181 127.77 precipitation 0.1 90 < th dose dependent rect. 3 6
186 128.02 radiation 10.0 270 < th dose dependent rect. 1 18
187 128.04 temperature 30.0 90 < th dose independent rect. 3 6
192 128.17 temperature 15.0 270 > th dose independent rect. 20 16
205 128.58 humidity 50.0 270 > th dose independent rect. 20 16
207 128.60 temperature 10.0 90 > th dose independent rect. 3 6
210 128.60 atmosphere 995.0 90 > th dose independent rect. 3 6
224 129.21 wind 9.0 270 < th dose dependent rect. 2 4
225 129.24 temperature 10.0 270 > th dose independent rect. 12 8
226 129.24 atmosphere 1015.0 270 < th dose independent rect. 12 8
228 129.24 atmosphere 995.0 270 > th dose independent rect. 20 16
229 129.25 wind 9.0 270 < th dose independent rect. 20 16
271 129.84 precipitation 0.1 270 < th dose independent rect. 2 4
272 129.84 precipitation 0.1 270 < th dose dependent rect. 2 4
282 130.10 atmosphere 1015.0 270 < th dose independent rect. 20 5
286 130.21 wind 9.0 270 < th dose independent rect. 12 8
290 130.24 atmosphere 995.0 270 > th dose independent rect. 7 18
319 130.36 radiation 40.0 90 < th dose dependent rect. 3 18
351 131.02 atmosphere 1015.0 270 < th dose independent rect. 7 18
361 131.31 temperature 10.0 270 > th dose dependent rect. 2 4
414 131.59 radiation 40.0 270 < th dose independent rect. 14 16
477 132.31 precipitation 0.1 270 < th dose independent rect. 6 8
478 132.31 precipitation 0.1 270 < th dose dependent rect. 6 8
484 132.38 wind 1.0 270 > th dose independent rect. 8 17
490 132.45 temperature 10.0 270 > th dose independent rect. 6 8
491 132.45 atmosphere 995.0 270 > th dose independent rect. 6 8
492 132.45 atmosphere 1015.0 270 < th dose independent rect. 6 8
493 132.45 temperature 10.0 270 > th dose independent rect. 14 16
496 132.61 precipitation 0.1 270 < th dose independent rect. 20 16
497 132.61 precipitation 0.1 270 < th dose dependent rect. 20 16
502 132.69 radiation 40.0 90 < th dose independent rect. 3 18
530 132.90 atmosphere 995.0 270 > th dose independent rect. 1 19
541 133.09 wind 9.0 270 < th dose independent rect. 6 8
554 133.37 wind 1.0 270 > th dose independent rect. 20 5
556 133.44 wind 9.0 270 < th dose independent rect. 14 16
561 133.54 humidity 70.0 10 > th dose independent rect. 3 7
566 133.64 wind 1.0 270 > th dose independent rect. 12 8
567 133.67 humidity 50.0 270 > th dose dependent rect. 20 5
579 133.90 wind 9.0 270 < th dose dependent rect. 3 2
597 134.12 precipitation 0.1 270 < th dose independent rect. 3 2
598 134.12 precipitation 0.1 270 < th dose independent rect. 12 8
599 134.12 precipitation 0.1 270 < th dose dependent rect. 3 2
600 134.12 precipitation 0.1 270 < th dose dependent rect. 12 8
601 134.13 wind 9.0 270 < th dose dependent rect. 20 5
644 134.73 wind 5.0 270 < th dose independent rect. 3 2
695 135.24 radiation 20.0 90 < th dose independent rect. 3 18
718 135.50 humidity 50.0 270 > th dose dependent rect. 2 4
739 135.81 humidity 50.0 270 > th dose independent rect. 6 8
743 135.88 wind 9.0 270 < th dose independent rect. 5 22
750 135.97 wind 1.0 270 > th dose independent rect. 19 7
758 136.08 radiation 1.0 270 < th dose independent rect. 3 2
763 136.13 temperature 10.0 270 > th dose independent rect. 3 2
765 136.13 temperature 30.0 270 < th dose independent rect. 3 2
766 136.13 humidity 50.0 270 > th dose independent rect. 3 2
769 136.13 atmosphere 995.0 270 > th dose independent rect. 3 2
770 136.13 atmosphere 1010.0 270 < th dose independent rect. 3 2
775 136.13 temperature 10.0 270 > th dose independent rect. 5 22
776 136.13 radiation 30.0 270 < th dose dependent rect. 3 2
778 136.14 radiation 10.0 270 < th dose dependent rect. 3 2
806 136.35 precipitation 0.1 270 < th dose independent rect. 14 16
807 136.35 precipitation 0.1 270 < th dose dependent rect. 14 16
839 136.71 atmosphere 1015.0 270 < th dose independent rect. 20 16
843 136.77 temperature 10.0 270 > th dose dependent rect. 3 2
881 137.09 temperature 15.0 10 > th dose independent rect. 9 18
892 137.24 radiation 10.0 270 < th dose independent rect. 1 18
944 137.70 atmosphere 995.0 270 > th dose independent rect. 12 8
987 138.14 wind 5.0 10 < th dose independent rect. 3 6