Os03g0851400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Frigida-like family protein.
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Os03g0851400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Frigida-like family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 219.21 | 0.696 | 4.96 | -0.0574 | 1.97 | 1.5 | -0.972 | 1.19 | 0.278 | 21 | 24.9 | 10 | -- | -- |
| 219.83 | 0.696 | 4.98 | -0.193 | 1.98 | 1.63 | -1.04 | -- | 0.243 | 21 | 24.9 | 10 | -- | -- |
| 222.34 | 0.7 | 4.96 | 0.0344 | 1.98 | 1.47 | -- | 1.67 | 0.298 | 20.9 | 24.9 | 10 | -- | -- |
| 223.49 | 0.696 | 4.98 | -0.165 | 1.98 | 1.61 | -- | -- | 0.238 | 21 | 24.9 | 10 | -- | -- |
| 388.01 | 0.917 | 4.94 | -0.282 | -- | 1.89 | -- | 0.0732 | 0.17 | -- | 24.2 | 493 | -- | -- |
| 260.54 | 0.757 | 4.95 | 0.058 | 2.06 | -- | -0.863 | -- | 0.38 | 19.9 | -- | -- | -- | -- |
| 262.69 | 0.759 | 4.95 | 0.0816 | 2.06 | -- | -- | -- | 0.38 | 19.8 | -- | -- | -- | -- |
| 388 | 0.917 | 4.94 | -0.29 | -- | 1.9 | -- | -- | 0.16 | -- | 24.2 | 495 | -- | -- |
| 224.18 | 0.697 | 4.98 | -- | 1.98 | 1.56 | -- | -- | 0.259 | 21 | 24.9 | 10 | -- | -- |
| 492.27 | 1.04 | 4.9 | 0.0575 | -- | -- | -- | -- | 0.351 | -- | -- | -- | -- | -- |
| 262.87 | 0.758 | 4.95 | -- | 2.06 | -- | -- | -- | 0.371 | 19.8 | -- | -- | -- | -- |
| 390.12 | 0.92 | 4.93 | -- | -- | 1.85 | -- | -- | 0.197 | -- | 24.23 | 478 | -- | -- |
| 492.36 | 1.04 | 4.9 | -- | -- | -- | -- | -- | 0.345 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 204.64 | temperature | 25 | 10 | > th | dose dependent | sin | 2 | NA |
| 15 | 207.56 | temperature | 20 | 270 | > th | dose dependent | rect. | 5 | 9 |
| 21 | 208.09 | temperature | 25 | 10 | > th | dose dependent | rect. | 8 | 8 |
| 29 | 209.26 | temperature | 25 | 10 | > th | dose dependent | rect. | 23 | 17 |
| 34 | 209.72 | temperature | 25 | 10 | > th | dose dependent | rect. | 6 | 10 |
| 39 | 210.02 | temperature | 25 | 10 | > th | dose dependent | rect. | 3 | 13 |
| 84 | 212.04 | temperature | 25 | 270 | > th | dose independent | rect. | 6 | 8 |
| 85 | 212.14 | temperature | 25 | 10 | > th | dose dependent | rect. | 8 | 6 |
| 99 | 212.91 | temperature | 25 | 90 | > th | dose independent | sin | 2 | NA |
| 182 | 214.46 | temperature | 25 | 90 | > th | dose independent | rect. | 8 | 8 |
| 197 | 214.66 | temperature | 30 | 90 | < th | dose dependent | sin | 2 | NA |
| 270 | 215.92 | temperature | 25 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 281 | 216.10 | temperature | 25 | 90 | < th | dose independent | sin | 2 | NA |
| 297 | 216.31 | temperature | 25 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 322 | 216.56 | temperature | 25 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 327 | 216.62 | temperature | 25 | 10 | > th | dose dependent | rect. | 8 | 18 |
| 330 | 216.66 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 14 |
| 371 | 217.15 | temperature | 25 | 10 | > th | dose dependent | rect. | 8 | 14 |
| 417 | 217.91 | temperature | 25 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 475 | 218.85 | temperature | 25 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 485 | 218.93 | temperature | 25 | 10 | > th | dose dependent | rect. | 6 | 20 |
| 507 | 219.28 | temperature | 25 | 10 | > th | dose dependent | no | NA | NA |
| 508 | 219.28 | temperature | 25 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 511 | 219.30 | temperature | 25 | 10 | > th | dose independent | rect. | 8 | 8 |
| 526 | 219.40 | temperature | 25 | 90 | > th | dose independent | rect. | 24 | 16 |
| 578 | 219.86 | temperature | 25 | 270 | < th | dose independent | rect. | 2 | 12 |
| 632 | 220.20 | temperature | 25 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 702 | 220.78 | temperature | 25 | 270 | > th | dose dependent | rect. | 8 | 3 |
| 836 | 221.84 | temperature | 25 | 90 | < th | dose independent | rect. | 5 | 11 |
| 927 | 222.50 | temperature | 25 | 10 | > th | dose independent | rect. | 8 | 10 |