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Os03g0848200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Phytase.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.89 (0.0525) R2 : 0.702
β1 : -1.57 (0.185) R2dD : 0.0713 R2D : -0.0309
β2 : 2.74 (0.101) R2dC : 0.487 R2C : 0.454
β3 : 6.67 (0.581) R2dE : 0.626 R2E : -0.125
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 14.9 (1.73) R2dD*E : 0.429 R2D*E : -0.754
γ1 : -0.454 (0.0942) R2dN8 : 0.0226 R2N8 : -0.0363
σ : 0.777
deviance : 278.01
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C
peak time of C : 22
E
wheather : radiation
threshold : 0.17
memory length : 1505
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 18.1
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
279.35 0.785 6.89 -1.56 2.72 6.58 -0.299 14.6 -0.44 21.9 0.1682 1523 18 --
327.63 0.843 6.7 -1.18 2.72 2.04 0.15 -- -0.457 22.2 1.02 1505 14.8 --
278.01 0.777 6.89 -1.57 2.74 6.67 -- 14.9 -0.454 22 0.17 1505 18.1 --
314.71 0.826 6.72 -1.28 2.63 2.14 -- -- -0.474 22 0.17 1473 10.3 --
428.09 0.969 6.6 -1.47 -- 2.62 -- -0.875 -0.561 -- 0.2842 1609 10.8 --
372.37 0.905 6.68 -1.63 2.83 -- -0.232 -- -0.578 22 -- -- -- --
372.58 0.904 6.68 -1.62 2.83 -- -- -- -0.578 22 -- -- -- --
369.2 0.895 6.6 -1.71 -- 2.82 -- -- -0.516 -- 84.74 79 8.83 --
343.15 0.863 6.72 -- 2.65 2.66 -- -- -0.327 22 0.1643 1463 11.1 --
855.12 1.37 6.6 -1.58 -- -- -- -- -0.575 -- -- -- -- --
441.71 0.983 6.64 -- 2.82 -- -- -- -0.397 22 -- -- -- --
436.47 0.973 6.55 -- -- 2.79 -- -- -0.353 -- 80.98 75 8.93 --
921.27 1.42 6.56 -- -- -- -- -- -0.399 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 278.27 radiation 40.0 14400 < th dose dependent rect. 21 8
7 282.09 radiation 40.0 14400 < th dose dependent rect. 19 10
8 282.25 radiation 20.0 14400 > th dose dependent rect. 16 15
12 282.58 radiation 20.0 14400 > th dose dependent rect. 16 1
26 282.74 humidity 80.0 14400 < th dose independent rect. 20 2
44 285.07 atmosphere 1010.0 14400 < th dose independent rect. 5 2
46 285.53 atmosphere 1010.0 14400 > th dose independent rect. 5 2
48 286.27 radiation 40.0 14400 > th dose dependent rect. 14 18
49 286.30 radiation 40.0 14400 > th dose dependent rect. 14 2
67 286.76 radiation 10.0 14400 < th dose dependent rect. 3 2
104 288.85 radiation 10.0 14400 < th dose dependent rect. 18 12
105 288.90 humidity 80.0 14400 > th dose independent rect. 19 3
106 288.97 radiation 1.0 14400 < th dose independent rect. 21 8
107 289.03 radiation 30.0 14400 < th dose independent rect. 15 13
108 289.04 radiation 30.0 14400 < th dose independent rect. 15 11
112 289.06 radiation 30.0 14400 < th dose independent rect. 15 3
129 289.50 radiation 10.0 43200 < th dose independent rect. 19 10
136 289.62 humidity 90.0 14400 < th dose dependent rect. 2 5
138 289.66 radiation 1.0 14400 > th dose dependent rect. 18 1
175 290.28 radiation 1.0 43200 > th dose independent rect. 4 1
185 290.28 radiation 1.0 43200 > th dose dependent rect. 4 1
239 291.69 radiation 10.0 14400 < th dose independent rect. 18 8
257 291.95 radiation 1.0 14400 < th dose dependent rect. 9 1
308 292.66 temperature 15.0 43200 > th dose independent rect. 12 1
313 292.80 temperature 15.0 43200 < th dose independent rect. 11 2
358 293.24 temperature 15.0 43200 < th dose independent rect. 7 6
361 293.28 precipitation 0.1 14400 > th dose dependent rect. 4 2
381 293.49 humidity 60.0 43200 < th dose dependent rect. 18 2
387 293.58 humidity 60.0 14400 > th dose independent rect. 16 1
408 293.92 precipitation 0.1 14400 > th dose independent rect. 4 2
409 293.93 humidity 80.0 14400 < th dose dependent rect. 20 1
440 294.21 humidity 60.0 14400 < th dose independent rect. 16 1
475 294.71 temperature 15.0 43200 < th dose independent rect. 7 10
483 294.80 temperature 15.0 43200 > th dose independent rect. 7 6
485 294.85 precipitation 0.1 14400 < th dose independent rect. 4 2
486 294.85 precipitation 0.1 14400 < th dose dependent rect. 4 2
487 294.88 temperature 15.0 43200 < th dose independent rect. 10 7
532 295.31 radiation 40.0 14400 < th dose dependent rect. 16 15
536 295.38 wind 9.0 43200 > th dose independent rect. 24 1
537 295.38 wind 9.0 43200 > th dose dependent rect. 24 1
592 295.62 temperature 15.0 43200 < th dose dependent rect. 17 17
593 295.63 humidity 70.0 14400 > th dose independent rect. 18 14
595 295.64 temperature 15.0 43200 < th dose dependent rect. 16 12
598 295.65 temperature 15.0 43200 > th dose independent rect. 7 10
626 295.74 wind 9.0 43200 > th dose dependent rect. 19 1
652 295.79 humidity 70.0 14400 < th dose independent rect. 16 16
654 295.79 temperature 15.0 43200 < th dose dependent rect. 24 12
661 295.81 humidity 70.0 14400 < th dose dependent rect. 16 1
674 295.84 temperature 15.0 43200 < th dose dependent sin 13 NA
675 295.85 temperature 15.0 43200 > th dose independent rect. 10 7
716 295.94 temperature 15.0 43200 < th dose dependent rect. 8 21
792 296.05 humidity 70.0 14400 < th dose independent rect. 18 14
832 296.13 temperature 15.0 43200 < th dose dependent rect. 23 22
853 296.17 temperature 15.0 43200 < th dose dependent no NA NA
879 296.21 temperature 15.0 43200 < th dose dependent rect. 24 18
913 296.30 temperature 15.0 43200 > th dose independent rect. 22 1
941 296.36 temperature 15.0 43200 < th dose dependent rect. 2 23
944 296.38 temperature 15.0 43200 > th dose independent rect. 15 1
945 296.39 temperature 15.0 43200 < th dose independent rect. 22 1
983 296.55 humidity 70.0 14400 < th dose independent rect. 16 5
985 296.56 temperature 15.0 43200 < th dose independent rect. 16 1
993 296.59 radiation 40.0 43200 > th dose dependent rect. 7 2