Os03g0847900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0847900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 228.19 | 0.71 | 6.86 | -4.81 | 1.1 | 3.8 | 1.83 | -2.7 | -0.57 | 6.93 | 15 | 1229 | 12.5 | -- |
| 233.18 | 0.711 | 6.8 | -4.32 | 1.03 | 3.83 | 1.55 | -- | -0.433 | 7.27 | 14.6 | 1218 | 12.3 | -- |
| 236.3 | 0.716 | 6.84 | -4.71 | 1.16 | 3.77 | -- | -2.34 | -0.544 | 7.21 | 15.32 | 1217 | 12.8 | -- |
| 238.82 | 0.72 | 6.8 | -4.27 | 0.877 | 4.03 | -- | -- | -0.461 | 8.57 | 14.14 | 1144 | 11.5 | -- |
| 244.54 | 0.728 | 6.86 | -4.37 | -- | 4.22 | -- | -0.691 | -0.531 | -- | 6.718 | 1192 | 10.2 | -- |
| 428.36 | 0.97 | 6.67 | -3.29 | 1.78 | -- | 1.78 | -- | 0.0718 | 5.27 | -- | -- | -- | -- |
| 436.27 | 0.978 | 6.68 | -3.29 | 1.79 | -- | -- | -- | 0.0633 | 5.2 | -- | -- | -- | -- |
| 244.78 | 0.729 | 6.84 | -4.26 | -- | 4.18 | -- | -- | -0.498 | -- | 6.119 | 1193 | 10.2 | -- |
| 662.41 | 1.2 | 6.64 | -- | 1.05 | 2.12 | -- | -- | 0.231 | 7.58 | 13.15 | 1012 | 10.7 | -- |
| 604.54 | 1.15 | 6.7 | -3.22 | -- | -- | -- | -- | 0.108 | -- | -- | -- | -- | -- |
| 720.84 | 1.26 | 6.59 | -- | 1.74 | -- | -- | -- | 0.429 | 5.27 | -- | -- | -- | -- |
| 665.26 | 1.2 | 6.68 | -- | -- | 2.74 | -- | -- | 0.189 | -- | 3.714 | 1007 | 8.66 | -- |
| 878.55 | 1.38 | 6.62 | -- | -- | -- | -- | -- | 0.466 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 233.46 | temperature | 15 | 1440 | > th | dose dependent | rect. | 13 | 5 |
| 9 | 234.06 | temperature | 15 | 1440 | > th | dose dependent | rect. | 11 | 8 |
| 148 | 239.79 | temperature | 10 | 1440 | > th | dose dependent | sin | 21 | NA |
| 460 | 249.03 | temperature | 30 | 1440 | < th | dose dependent | rect. | 13 | 8 |
| 627 | 252.01 | temperature | 30 | 1440 | < th | dose dependent | sin | 21 | NA |
| 820 | 254.63 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 849 | 255.06 | temperature | 15 | 720 | > th | dose dependent | rect. | 16 | 17 |
| 888 | 255.63 | temperature | 30 | 720 | < th | dose dependent | rect. | 14 | 18 |