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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0846200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Peptidase, trypsin-like serine and cysteine domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.83 (0.031) R2 : 0.153
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 3.08 (0.339) R2dE : 0.154 R2E : 0.153
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.021 (0.0652) R2dN8 : 0.000158 R2N8 : -0.000659
σ : 0.582
deviance : 155.96
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_____
C
peak time of C : --
E
wheather : atmosphere
threshold : 1003
memory length : 7
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 6.02
open length of G : 1.88

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
150.48 0.571 2.32 3.18 0.133 -107 -0.561 652 0.00119 7.52 1000 10 6 2
171.53 0.615 2.84 0.0672 0.129 1.62 -0.565 -- 0.00266 7.58 1000 10 6 2
151.3 0.573 2.32 3.18 0.133 -107 -- 652 0.00119 6.72 1000 10 6 2
155.17 0.58 2.83 0.113 0.0985 2.99 -- -- 0.0169 7.71 1003 5 6.02 1.9
152.12 0.574 2.31 3.21 -- -107 -- 653 0.0101 -- 999.9 8 6 2
181.63 0.632 2.84 0.0958 0.187 -- -0.385 -- -0.0126 7.32 -- -- -- --
182.01 0.632 2.84 0.0866 0.189 -- -- -- -0.0123 6.93 -- -- -- --
155.74 0.581 2.83 0.0963 -- 3.08 -- -- 0.017 -- 1003 6 6.05 1.92
155.34 0.58 2.83 -- 0.0993 3.04 -- -- 0.0191 6.63 1003 4 6.03 1.92
183.88 0.634 2.85 0.0905 -- -- -- -- -0.00877 -- -- -- -- --
182.21 0.631 2.85 -- 0.19 -- -- -- -0.022 6.9 -- -- -- --
155.96 0.582 2.83 -- -- 3.08 -- -- 0.021 -- 1003 7 6.02 1.88
184.1 0.633 2.85 -- -- -- -- -- -0.0188 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 150.48 atmosphere 1000.0 10 < th dose independent rect. 6 2
2 150.50 atmosphere 1000.0 10 < th dose dependent rect. 6 2
5 151.21 atmosphere 1000.0 90 < th dose independent rect. 6 1
7 151.21 atmosphere 1000.0 90 < th dose dependent rect. 6 1
44 158.40 atmosphere 1000.0 270 < th dose independent rect. 4 1
45 158.40 atmosphere 1000.0 270 < th dose dependent rect. 4 1
59 159.96 temperature 25.0 270 > th dose dependent rect. 4 1
83 166.59 temperature 25.0 270 > th dose independent rect. 4 1
110 168.19 precipitation 0.1 4320 < th dose independent rect. 2 1
111 168.19 precipitation 0.1 4320 < th dose dependent rect. 2 1
113 168.35 precipitation 0.1 4320 > th dose independent rect. 2 1
114 168.35 precipitation 0.1 4320 > th dose dependent rect. 2 1
170 170.81 radiation 30.0 90 > th dose independent rect. 7 1
215 171.40 wind 1.0 30 < th dose independent rect. 7 3
246 171.98 radiation 30.0 90 > th dose dependent rect. 7 1
270 172.07 atmosphere 995.0 1440 > th dose independent rect. 8 15
274 172.13 atmosphere 995.0 1440 > th dose independent rect. 1 22
281 172.19 atmosphere 1010.0 10 < th dose dependent rect. 24 1
284 172.29 atmosphere 995.0 1440 > th dose independent rect. 8 21
293 172.34 atmosphere 995.0 1440 > th dose independent rect. 8 19
295 172.34 atmosphere 1000.0 720 < th dose dependent rect. 20 12
299 172.41 atmosphere 1005.0 90 < th dose independent rect. 23 1
302 172.43 wind 1.0 30 < th dose independent rect. 7 1
308 172.51 atmosphere 995.0 1440 > th dose independent rect. 8 13
309 172.51 atmosphere 995.0 1440 > th dose independent rect. 1 16
354 172.77 atmosphere 995.0 1440 > th dose independent rect. 8 9
355 172.77 atmosphere 995.0 1440 > th dose independent rect. 15 12
356 172.77 temperature 25.0 270 > th dose independent rect. 19 13
374 172.86 atmosphere 995.0 1440 > th dose independent rect. 8 11
410 173.09 atmosphere 995.0 1440 > th dose independent rect. 15 14
441 173.31 temperature 25.0 90 > th dose independent rect. 7 1
465 173.41 atmosphere 995.0 1440 > th dose independent rect. 13 14
472 173.43 atmosphere 995.0 1440 > th dose independent rect. 15 8
474 173.45 atmosphere 995.0 1440 > th dose independent rect. 12 23
491 173.61 atmosphere 995.0 1440 > th dose independent rect. 4 23
497 173.64 atmosphere 995.0 1440 > th dose independent rect. 13 10
498 173.65 precipitation 0.1 14400 > th dose independent rect. 22 9
503 173.67 atmosphere 1000.0 270 < th dose dependent sin 6 NA
506 173.68 precipitation 0.1 14400 > th dose independent rect. 22 6
508 173.68 atmosphere 995.0 1440 > th dose independent rect. 18 23
511 173.69 precipitation 0.1 14400 < th dose independent rect. 22 9
514 173.69 precipitation 0.1 14400 < th dose dependent rect. 22 9
516 173.70 atmosphere 995.0 1440 > th dose independent rect. 15 20
521 173.71 precipitation 0.1 14400 < th dose independent rect. 22 6
523 173.71 atmosphere 995.0 1440 > th dose independent rect. 15 23
524 173.71 precipitation 0.1 14400 < th dose dependent rect. 22 6
531 173.72 atmosphere 995.0 1440 > th dose independent rect. 13 16
543 173.75 atmosphere 995.0 1440 > th dose independent sin 20 NA
544 173.75 atmosphere 995.0 1440 > th dose independent sin 6 NA
546 173.75 atmosphere 1000.0 10 < th dose dependent rect. 5 9
548 173.76 atmosphere 995.0 1440 > th dose independent sin 18 NA
567 173.79 atmosphere 995.0 1440 > th dose independent no NA NA
568 173.79 atmosphere 995.0 1440 < th dose independent sin 7 NA
570 173.79 atmosphere 995.0 1440 < th dose independent sin 11 NA
590 173.79 atmosphere 995.0 1440 < th dose independent no NA NA
591 173.79 atmosphere 995.0 1440 < th dose independent rect. 14 1
893 173.79 atmosphere 995.0 1440 < th dose dependent sin 7 NA
895 173.79 atmosphere 995.0 1440 < th dose dependent sin 11 NA
915 173.79 atmosphere 995.0 1440 < th dose dependent no NA NA
916 173.79 atmosphere 995.0 1440 < th dose dependent rect. 14 1