Os03g0845800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os03g0845800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26.65 | 0.243 | 8.78 | 0.986 | 0.935 | -0.893 | -0.192 | -1.92 | 0.133 | 22.2 | 25.78 | 104 | -- | -- |
| 30.73 | 0.258 | 8.82 | 0.672 | 0.874 | -0.813 | -0.576 | -- | 0.069 | 22.5 | 29.05 | 205 | -- | -- |
| 26.78 | 0.241 | 8.78 | 1.01 | 0.936 | -0.9 | -- | -2 | 0.134 | 22.2 | 25.92 | 102 | -- | -- |
| 32.13 | 0.264 | 8.82 | 0.674 | 0.886 | -0.81 | -- | -- | 0.0535 | 22.5 | 28.64 | 191 | -- | -- |
| 57.44 | 0.353 | 8.78 | 0.719 | -- | -1.33 | -- | -0.931 | 0.0661 | -- | 73.64 | 710 | -- | -- |
| 40.23 | 0.297 | 8.78 | 0.861 | 0.869 | -- | -0.555 | -- | 0.23 | 21.5 | -- | -- | -- | -- |
| 41.35 | 0.301 | 8.78 | 0.882 | 0.873 | -- | -- | -- | 0.231 | 21.4 | -- | -- | -- | -- |
| 58.06 | 0.355 | 8.8 | 0.552 | -- | -1.34 | -- | -- | 0.0253 | -- | 126.7 | 714 | -- | -- |
| 42.72 | 0.304 | 8.85 | -- | 0.909 | -1.09 | -- | -- | -0.0549 | 23 | 28.61 | 201 | -- | -- |
| 86.01 | 0.433 | 8.76 | 0.887 | -- | -- | -- | -- | 0.228 | -- | -- | -- | -- | -- |
| 61.85 | 0.368 | 8.8 | -- | 0.874 | -- | -- | -- | 0.133 | 21.5 | -- | -- | -- | -- |
| 64.72 | 0.375 | 8.83 | -- | -- | -1.51 | -- | -- | -0.0774 | -- | 30.3 | 736 | -- | -- |
| 106.76 | 0.482 | 8.78 | -- | -- | -- | -- | -- | 0.129 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 26.80 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 22 |
| 2 | 26.84 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 3 | 26.85 | temperature | 25 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 7 | 26.94 | temperature | 25 | 90 | < th | dose dependent | no | NA | NA |
| 13 | 26.97 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 16 | 27.00 | temperature | 25 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 17 | 27.01 | temperature | 25 | 720 | < th | dose dependent | rect. | 7 | 16 |
| 19 | 27.03 | temperature | 25 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 36 | 27.15 | temperature | 25 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 41 | 27.18 | temperature | 25 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 53 | 27.23 | temperature | 25 | 720 | < th | dose dependent | sin | 20 | NA |
| 75 | 27.36 | temperature | 25 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 179 | 27.82 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 22 |
| 358 | 28.39 | temperature | 20 | 90 | > th | dose dependent | rect. | 9 | 20 |
| 361 | 28.40 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 468 | 28.70 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 2 |
| 477 | 28.73 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 4 |
| 482 | 28.73 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 500 | 28.75 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 518 | 28.78 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 23 |
| 531 | 28.80 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 532 | 28.81 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 539 | 28.82 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 596 | 28.91 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 666 | 29.04 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 680 | 29.06 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 723 | 29.11 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 20 |
| 794 | 29.19 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 6 |
| 884 | 29.25 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 910 | 29.28 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 923 | 29.28 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 23 |