Os03g0845500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Acyl-CoA synthetase-like protein.
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Os03g0845500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Acyl-CoA synthetase-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 36.66 | 0.284 | 9.98 | -0.541 | 1.03 | -0.583 | -0.153 | -0.421 | -0.0339 | 15.4 | 20.2 | 197 | -- | -- |
| 37.22 | 0.284 | 9.97 | -0.472 | 1.03 | -0.533 | -0.335 | -- | -0.019 | 15.4 | 20.3 | 185 | -- | -- |
| 36.7 | 0.282 | 9.98 | -0.545 | 1.03 | -0.574 | -- | -0.427 | -0.0306 | 15.4 | 20.24 | 185 | -- | -- |
| 37.57 | 0.285 | 9.97 | -0.483 | 1.02 | -0.533 | -- | -- | -0.0204 | 15.4 | 20.35 | 185 | -- | -- |
| 88.61 | 0.438 | 9.98 | -0.633 | -- | -0.469 | -- | -0.31 | -0.0626 | -- | 21.3 | 1200 | -- | -- |
| 46.94 | 0.321 | 9.99 | -0.635 | 0.928 | -- | -0.377 | -- | -0.118 | 15.5 | -- | -- | -- | -- |
| 47.38 | 0.322 | 9.99 | -0.641 | 0.926 | -- | -- | -- | -0.12 | 15.5 | -- | -- | -- | -- |
| 79.15 | 0.414 | 9.95 | -0.419 | -- | -0.743 | -- | -- | 0.0609 | -- | 25.28 | 2575 | -- | -- |
| 43.24 | 0.306 | 9.96 | -- | 1.05 | -0.645 | -- | -- | 0.05 | 15.4 | 20.4 | 211 | -- | -- |
| 95.27 | 0.456 | 9.99 | -0.68 | -- | -- | -- | -- | -0.145 | -- | -- | -- | -- | -- |
| 58.22 | 0.357 | 9.98 | -- | 0.938 | -- | -- | -- | -0.0486 | 15.5 | -- | -- | -- | -- |
| 83.77 | 0.426 | 9.96 | -- | -- | -0.782 | -- | -- | 0.0749 | -- | 25.2 | 2625 | -- | -- |
| 107.48 | 0.484 | 9.98 | -- | -- | -- | -- | -- | -0.0691 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.07 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 8 |
| 2 | 27.24 | temperature | 20 | 270 | > th | dose independent | rect. | 22 | 6 |
| 3 | 27.28 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 8 |
| 10 | 28.04 | temperature | 30 | 270 | < th | dose dependent | rect. | 18 | 14 |
| 18 | 28.84 | temperature | 20 | 270 | > th | dose independent | rect. | 23 | 4 |
| 37 | 29.66 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 5 |
| 49 | 30.20 | temperature | 20 | 90 | > th | dose independent | rect. | 11 | 18 |
| 68 | 30.44 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 8 |
| 85 | 30.69 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 2 |
| 119 | 31.09 | temperature | 25 | 270 | < th | dose dependent | sin | 12 | NA |
| 171 | 31.59 | temperature | 20 | 270 | > th | dose dependent | rect. | 24 | 2 |
| 220 | 31.97 | temperature | 20 | 90 | > th | dose independent | rect. | 13 | 16 |
| 231 | 32.08 | temperature | 20 | 90 | > th | dose independent | rect. | 15 | 14 |
| 288 | 32.49 | temperature | 20 | 270 | > th | dose independent | rect. | 9 | 20 |
| 309 | 32.63 | temperature | 15 | 270 | > th | dose dependent | sin | 11 | NA |
| 355 | 32.83 | temperature | 25 | 720 | < th | dose independent | rect. | 18 | 6 |
| 367 | 32.89 | temperature | 20 | 270 | < th | dose independent | rect. | 20 | 11 |
| 389 | 33.00 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 1 |
| 391 | 33.01 | temperature | 25 | 720 | > th | dose independent | rect. | 16 | 10 |
| 523 | 33.55 | temperature | 20 | 270 | < th | dose independent | sin | 12 | NA |
| 527 | 33.56 | temperature | 20 | 270 | > th | dose independent | sin | 11 | NA |
| 635 | 33.91 | temperature | 20 | 720 | > th | dose dependent | sin | 14 | NA |
| 734 | 34.21 | temperature | 20 | 10 | < th | dose independent | rect. | 20 | 12 |
| 757 | 34.27 | temperature | 20 | 10 | < th | dose independent | sin | 10 | NA |