Os03g0844800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0844800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 216.21 | 0.691 | 3.64 | -0.493 | 0.581 | 15.7 | -0.654 | 29.2 | -0.105 | 8.03 | 2 | 1 | 10 | 1 |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 251.56 | 0.744 | 3.61 | -0.602 | 0.643 | -- | -0.632 | -- | -0.131 | 8.25 | -- | -- | -- | -- |
| 252.43 | 0.744 | 3.61 | -0.618 | 0.641 | -- | -- | -- | -0.128 | 8.71 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 275.68 | 0.776 | 3.63 | -0.617 | -- | -- | -- | -- | -0.123 | -- | -- | -- | -- | -- |
| 262.49 | 0.758 | 3.6 | -- | 0.639 | -- | -- | -- | -0.0595 | 8.79 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 285.7 | 0.789 | 3.61 | -- | -- | -- | -- | -- | -0.0547 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 216.21 | humidity | 60 | 10 | < th | dose independent | rect. | 10 | 1 |
| 3 | 216.21 | humidity | 60 | 10 | < th | dose dependent | rect. | 10 | 1 |
| 5 | 217.79 | wind | 5 | 10 | > th | dose dependent | rect. | 3 | 8 |
| 7 | 217.87 | wind | 5 | 10 | > th | dose dependent | rect. | 8 | 3 |
| 91 | 220.66 | wind | 7 | 90 | > th | dose dependent | rect. | 9 | 1 |
| 117 | 221.05 | wind | 7 | 30 | > th | dose independent | rect. | 3 | 8 |
| 119 | 221.08 | wind | 9 | 10 | > th | dose independent | rect. | 21 | 14 |
| 128 | 221.16 | wind | 5 | 10 | > th | dose independent | rect. | 10 | 1 |
| 257 | 222.83 | temperature | 20 | 270 | < th | dose independent | rect. | 23 | 8 |
| 380 | 227.03 | temperature | 20 | 270 | < th | dose dependent | rect. | 24 | 5 |
| 451 | 229.99 | temperature | 20 | 270 | < th | dose independent | rect. | 3 | 1 |
| 454 | 230.05 | temperature | 20 | 270 | < th | dose dependent | rect. | 3 | 1 |
| 556 | 232.49 | wind | 9 | 10 | > th | dose independent | sin | 9 | NA |
| 592 | 233.02 | temperature | 20 | 720 | < th | dose independent | rect. | 22 | 1 |
| 618 | 233.34 | humidity | 60 | 10 | > th | dose independent | sin | 8 | NA |
| 713 | 234.64 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 11 |
| 733 | 234.90 | temperature | 20 | 270 | < th | dose independent | sin | 10 | NA |
| 736 | 234.91 | wind | 3 | 90 | < th | dose independent | rect. | 1 | 10 |
| 748 | 235.04 | wind | 9 | 10 | < th | dose independent | sin | 6 | NA |
| 768 | 235.32 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 4 |
| 769 | 235.32 | temperature | 20 | 720 | > th | dose independent | rect. | 16 | 10 |
| 775 | 235.36 | temperature | 20 | 270 | > th | dose independent | sin | 11 | NA |
| 776 | 235.36 | temperature | 20 | 720 | > th | dose independent | rect. | 17 | 8 |
| 818 | 235.78 | humidity | 80 | 720 | < th | dose independent | rect. | 23 | 7 |
| 822 | 235.82 | temperature | 20 | 270 | < th | dose independent | rect. | 5 | 1 |
| 845 | 236.03 | humidity | 80 | 720 | < th | dose dependent | rect. | 23 | 7 |
| 975 | 237.10 | humidity | 80 | 1440 | > th | dose independent | rect. | 24 | 3 |
| 977 | 237.12 | humidity | 80 | 1440 | > th | dose independent | rect. | 24 | 6 |