Os03g0844600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Lipolytic enzyme, G-D-S-L family protein.
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Os03g0844600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Lipolytic enzyme, G-D-S-L family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 227.29 | 0.708 | 3.73 | -1.99 | 0.483 | 1.63 | -0.43 | -3.67 | -0.352 | 3.36 | 21.53 | 1231 | -- | -- |
| 234.73 | 0.714 | 3.61 | -1.1 | 0.703 | 1.88 | -0.55 | -- | -0.107 | 3.51 | 13.94 | 1959 | -- | -- |
| 227.85 | 0.703 | 3.73 | -2.01 | 0.477 | 1.64 | -- | -3.76 | -0.361 | 3.38 | 21.46 | 1224 | -- | -- |
| 235.67 | 0.715 | 3.61 | -1.09 | 0.701 | 1.88 | -- | -- | -0.104 | 3.6 | 14.2 | 1963 | -- | -- |
| 239.77 | 0.721 | 3.74 | -2.05 | -- | 1.79 | -- | -3.97 | -0.373 | -- | 21.59 | 1171 | -- | -- |
| 295.09 | 0.805 | 3.54 | -0.471 | 0.685 | -- | -0.558 | -- | 0.249 | 2.69 | -- | -- | -- | -- |
| 296.18 | 0.806 | 3.53 | -0.458 | 0.683 | -- | -- | -- | 0.252 | 2.71 | -- | -- | -- | -- |
| 248.41 | 0.734 | 3.61 | -1.06 | -- | 2.1 | -- | -- | -0.102 | -- | 14.71 | 1152 | -- | -- |
| 261.08 | 0.753 | 3.56 | -- | 0.691 | 1.14 | -- | -- | 0.0962 | 3.35 | 20.21 | 1902 | -- | -- |
| 323.35 | 0.84 | 3.53 | -0.429 | -- | -- | -- | -- | 0.27 | -- | -- | -- | -- | -- |
| 301.7 | 0.813 | 3.52 | -- | 0.674 | -- | -- | -- | 0.303 | 2.7 | -- | -- | -- | -- |
| 272.2 | 0.768 | 3.57 | -- | -- | 1.27 | -- | -- | 0.0954 | -- | 21.44 | 1143 | -- | -- |
| 328.2 | 0.846 | 3.52 | -- | -- | -- | -- | -- | 0.317 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 216.75 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 14 |
| 3 | 217.59 | temperature | 20 | 720 | > th | dose dependent | sin | 13 | NA |
| 13 | 219.84 | temperature | 20 | 720 | > th | dose dependent | rect. | 13 | 18 |
| 34 | 222.21 | temperature | 10 | 720 | > th | dose dependent | rect. | 11 | 18 |
| 51 | 223.02 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 5 |
| 85 | 224.18 | temperature | 30 | 720 | < th | dose dependent | sin | 14 | NA |
| 125 | 224.86 | temperature | 30 | 720 | < th | dose dependent | rect. | 14 | 17 |
| 183 | 225.87 | temperature | 25 | 4320 | < th | dose independent | rect. | 4 | 9 |
| 191 | 225.97 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 12 |
| 196 | 226.06 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 10 |
| 217 | 226.33 | temperature | 25 | 4320 | > th | dose independent | rect. | 4 | 9 |
| 218 | 226.33 | temperature | 25 | 4320 | > th | dose independent | rect. | 3 | 11 |
| 222 | 226.37 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 235 | 226.51 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 240 | 226.56 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 5 |
| 286 | 226.99 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 21 |
| 306 | 227.18 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 331 | 227.31 | temperature | 25 | 4320 | > th | dose independent | sin | 4 | NA |
| 336 | 227.37 | temperature | 25 | 4320 | < th | dose independent | sin | 4 | NA |
| 348 | 227.51 | temperature | 25 | 4320 | > th | dose independent | rect. | 3 | 15 |
| 350 | 227.55 | temperature | 25 | 4320 | < th | dose independent | rect. | 3 | 16 |
| 464 | 228.25 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 529 | 228.56 | temperature | 25 | 4320 | > th | dose independent | rect. | 22 | 20 |
| 569 | 228.70 | humidity | 90 | 43200 | > th | dose independent | rect. | 2 | 21 |
| 571 | 228.72 | temperature | 20 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 572 | 228.72 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 583 | 228.76 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 594 | 228.80 | temperature | 25 | 4320 | < th | dose independent | rect. | 23 | 20 |
| 615 | 228.89 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 620 | 228.90 | humidity | 90 | 43200 | > th | dose independent | rect. | 2 | 17 |
| 628 | 228.92 | humidity | 90 | 43200 | > th | dose dependent | rect. | 4 | 20 |
| 629 | 228.93 | humidity | 90 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 635 | 228.94 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 652 | 229.04 | temperature | 20 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 669 | 229.07 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 23 |
| 672 | 229.08 | humidity | 90 | 43200 | > th | dose dependent | rect. | 3 | 16 |
| 682 | 229.12 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 709 | 229.19 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 731 | 229.26 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 776 | 229.39 | wind | 3 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 808 | 229.47 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 863 | 229.62 | temperature | 25 | 1440 | > th | dose independent | rect. | 16 | 8 |
| 915 | 229.74 | humidity | 90 | 43200 | > th | dose dependent | sin | 1 | NA |
| 929 | 229.78 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 13 |
| 930 | 229.78 | humidity | 90 | 43200 | > th | dose dependent | sin | 19 | NA |
| 932 | 229.78 | humidity | 90 | 43200 | > th | dose dependent | rect. | 8 | 17 |
| 947 | 229.82 | wind | 3 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 997 | 229.91 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 2 |